Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 TUBB8P12-201ENST00000308911 1335 ntBASIC16.79■□□□□ 0.28
SCAMP4Q969E2 TUBB7P-202ENST00000428444 1305 ntBASIC16.79■□□□□ 0.28
SCAMP4Q969E2 TUBB8P7-204ENST00000567960 1332 ntBASIC16.79■□□□□ 0.28
SCAMP4Q969E2 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCAMP4Q969E2 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCAMP4Q969E2 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.79■□□□□ 0.28
SCAMP4Q969E2 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCAMP4Q969E2 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.79■□□□□ 0.28
SCAMP4Q969E2 MCCD1P2-201ENST00000423228 335 ntBASIC16.79■□□□□ 0.28
SCAMP4Q969E2 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.79■□□□□ 0.28
SCAMP4Q969E2 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.79■□□□□ 0.28
SCAMP4Q969E2 AC074386.1-202ENST00000463561 864 ntBASIC16.79■□□□□ 0.28
SCAMP4Q969E2 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.79■□□□□ 0.28
SCAMP4Q969E2 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.79■□□□□ 0.28
SCAMP4Q969E2 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.79■□□□□ 0.28
SCAMP4Q969E2 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.79■□□□□ 0.28
SCAMP4Q969E2 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.79■□□□□ 0.28
SCAMP4Q969E2 MPDU1-223ENST00000582151 728 ntBASIC16.79■□□□□ 0.28
SCAMP4Q969E2 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.79■□□□□ 0.28
SCAMP4Q969E2 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCAMP4Q969E2 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.79■□□□□ 0.28
SCAMP4Q969E2 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCAMP4Q969E2 AC022211.2-201ENST00000585075 2527 ntBASIC16.79■□□□□ 0.28
SCAMP4Q969E2 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.79■□□□□ 0.28
SCAMP4Q969E2 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.79■□□□□ 0.28
SCAMP4Q969E2 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCAMP4Q969E2 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.79■□□□□ 0.28
SCAMP4Q969E2 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCAMP4Q969E2 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCAMP4Q969E2 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SCAMP4Q969E2 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCAMP4Q969E2 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SCAMP4Q969E2 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCAMP4Q969E2 LTB4R2-202ENST00000528054 3092 ntBASIC16.78■□□□□ 0.28
SCAMP4Q969E2 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCAMP4Q969E2 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCAMP4Q969E2 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.78■□□□□ 0.28
SCAMP4Q969E2 AC092919.2-201ENST00000623631 1645 ntBASIC16.78■□□□□ 0.28
SCAMP4Q969E2 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCAMP4Q969E2 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCAMP4Q969E2 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SCAMP4Q969E2 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCAMP4Q969E2 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCAMP4Q969E2 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCAMP4Q969E2 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.78■□□□□ 0.28
SCAMP4Q969E2 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCAMP4Q969E2 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCAMP4Q969E2 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.78■□□□□ 0.28
SCAMP4Q969E2 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.78■□□□□ 0.28
SCAMP4Q969E2 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.78■□□□□ 0.28
SCAMP4Q969E2 MIR4515-201ENST00000584082 81 ntBASIC16.78■□□□□ 0.28
SCAMP4Q969E2 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.78■□□□□ 0.28
SCAMP4Q969E2 MTDHP5-201ENST00000598980 586 ntBASIC16.78■□□□□ 0.28
SCAMP4Q969E2 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.78■□□□□ 0.28
SCAMP4Q969E2 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.78■□□□□ 0.28
SCAMP4Q969E2 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SCAMP4Q969E2 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.78■□□□□ 0.28
SCAMP4Q969E2 AC005915.1-201ENST00000624912 2018 ntBASIC16.78■□□□□ 0.28
SCAMP4Q969E2 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SCAMP4Q969E2 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCAMP4Q969E2 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SCAMP4Q969E2 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SCAMP4Q969E2 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCAMP4Q969E2 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SCAMP4Q969E2 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
SCAMP4Q969E2 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SCAMP4Q969E2 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SCAMP4Q969E2 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
SCAMP4Q969E2 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SCAMP4Q969E2 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SCAMP4Q969E2 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
SCAMP4Q969E2 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SCAMP4Q969E2 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SCAMP4Q969E2 AC012569.1-201ENST00000591191 1524 ntBASIC16.77■□□□□ 0.28
SCAMP4Q969E2 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SCAMP4Q969E2 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SCAMP4Q969E2 AC131009.4-201ENST00000624048 1740 ntBASIC16.77■□□□□ 0.28
SCAMP4Q969E2 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.77■□□□□ 0.28
SCAMP4Q969E2 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SCAMP4Q969E2 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SCAMP4Q969E2 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
SCAMP4Q969E2 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SCAMP4Q969E2 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SCAMP4Q969E2 HMGA1P7-201ENST00000406908 502 ntBASIC16.77■□□□□ 0.28
SCAMP4Q969E2 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.77■□□□□ 0.28
SCAMP4Q969E2 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.77■□□□□ 0.28
SCAMP4Q969E2 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SCAMP4Q969E2 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.77■□□□□ 0.28
SCAMP4Q969E2 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.77■□□□□ 0.28
SCAMP4Q969E2 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SCAMP4Q969E2 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.77■□□□□ 0.28
SCAMP4Q969E2 AC091167.2-201ENST00000579581 588 ntBASIC16.77■□□□□ 0.28
SCAMP4Q969E2 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.77■□□□□ 0.28
SCAMP4Q969E2 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.77■□□□□ 0.28
SCAMP4Q969E2 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SCAMP4Q969E2 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SCAMP4Q969E2 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SCAMP4Q969E2 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.77■□□□□ 0.27
SCAMP4Q969E2 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SCAMP4Q969E2 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms