Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC15.6■□□□□ 0.09
HPS1Q92902 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
HPS1Q92902 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
HPS1Q92902 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC15.6■□□□□ 0.09
HPS1Q92902 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.6■□□□□ 0.09
HPS1Q92902 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HPS1Q92902 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
HPS1Q92902 MYLKP1-201ENST00000509077 1580 ntBASIC15.6■□□□□ 0.09
HPS1Q92902 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HPS1Q92902 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.6■□□□□ 0.09
HPS1Q92902 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HPS1Q92902 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HPS1Q92902 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HPS1Q92902 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
HPS1Q92902 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HPS1Q92902 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.6■□□□□ 0.09
HPS1Q92902 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC15.6■□□□□ 0.09
HPS1Q92902 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
HPS1Q92902 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HPS1Q92902 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
HPS1Q92902 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
HPS1Q92902 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HPS1Q92902 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HPS1Q92902 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.59■□□□□ 0.09
HPS1Q92902 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HPS1Q92902 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HPS1Q92902 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HPS1Q92902 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
HPS1Q92902 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC15.59■□□□□ 0.09
HPS1Q92902 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HPS1Q92902 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HPS1Q92902 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
HPS1Q92902 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HPS1Q92902 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HPS1Q92902 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HPS1Q92902 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
HPS1Q92902 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HPS1Q92902 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HPS1Q92902 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.59■□□□□ 0.09
HPS1Q92902 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HPS1Q92902 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
HPS1Q92902 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
HPS1Q92902 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC15.59■□□□□ 0.09
HPS1Q92902 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HPS1Q92902 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HPS1Q92902 TPM4P1-201ENST00000436100 807 ntBASIC15.59■□□□□ 0.09
HPS1Q92902 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC15.59■□□□□ 0.09
HPS1Q92902 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.59■□□□□ 0.09
HPS1Q92902 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
HPS1Q92902 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.59■□□□□ 0.09
HPS1Q92902 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HPS1Q92902 MIR3917-201ENST00000580971 93 ntBASIC15.59■□□□□ 0.09
HPS1Q92902 CLEC4GP1-201ENST00000596555 870 ntBASIC15.59■□□□□ 0.09
HPS1Q92902 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HPS1Q92902 BCL10-202ENST00000620248 774 ntTSL 5 BASIC15.59■□□□□ 0.09
HPS1Q92902 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
HPS1Q92902 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HPS1Q92902 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
HPS1Q92902 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
HPS1Q92902 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HPS1Q92902 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HPS1Q92902 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC15.59■□□□□ 0.09
HPS1Q92902 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC15.59■□□□□ 0.09
HPS1Q92902 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
HPS1Q92902 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HPS1Q92902 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HPS1Q92902 KRT8P50-201ENST00000562022 1438 ntBASIC15.59■□□□□ 0.09
HPS1Q92902 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
HPS1Q92902 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HPS1Q92902 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
HPS1Q92902 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.58■□□□□ 0.09
HPS1Q92902 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.58■□□□□ 0.09
HPS1Q92902 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.58■□□□□ 0.09
HPS1Q92902 FLJ16779-201ENST00000612722 7638 ntBASIC15.58■□□□□ 0.09
HPS1Q92902 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
HPS1Q92902 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.58■□□□□ 0.09
HPS1Q92902 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
HPS1Q92902 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.58■□□□□ 0.08
HPS1Q92902 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HPS1Q92902 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HPS1Q92902 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
HPS1Q92902 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
HPS1Q92902 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
HPS1Q92902 KRTAP4-4-201ENST00000390661 1081 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
HPS1Q92902 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.58■□□□□ 0.08
HPS1Q92902 SPDYE13P-201ENST00000445314 798 ntBASIC15.58■□□□□ 0.08
HPS1Q92902 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
HPS1Q92902 NAT14-202ENST00000587400 416 ntTSL 5 BASIC15.58■□□□□ 0.08
HPS1Q92902 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
HPS1Q92902 AL121672.3-201ENST00000608644 468 ntBASIC15.58■□□□□ 0.08
HPS1Q92902 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.58■□□□□ 0.08
HPS1Q92902 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HPS1Q92902 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
HPS1Q92902 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.58■□□□□ 0.08
HPS1Q92902 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
HPS1Q92902 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
HPS1Q92902 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.58■□□□□ 0.08
HPS1Q92902 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.58■□□□□ 0.08
HPS1Q92902 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
HPS1Q92902 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms