Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.01■□□□□ 0.31
SLC44A1Q8WWI5 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.01■□□□□ 0.31
SLC44A1Q8WWI5 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SLC44A1Q8WWI5 AC013467.2-201ENST00000605472 835 ntBASIC17.01■□□□□ 0.31
SLC44A1Q8WWI5 AL590326.2-201ENST00000625139 305 ntBASIC17.01■□□□□ 0.31
SLC44A1Q8WWI5 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.01■□□□□ 0.31
SLC44A1Q8WWI5 CROCCP1-201ENST00000426910 5675 ntBASIC17.01■□□□□ 0.31
SLC44A1Q8WWI5 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC44A1Q8WWI5 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
SLC44A1Q8WWI5 SIGLEC16-201ENST00000599858 1437 ntBASIC17.01■□□□□ 0.31
SLC44A1Q8WWI5 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
SLC44A1Q8WWI5 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC44A1Q8WWI5 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC44A1Q8WWI5 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.01■□□□□ 0.31
SLC44A1Q8WWI5 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SLC44A1Q8WWI5 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC44A1Q8WWI5 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC44A1Q8WWI5 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SLC44A1Q8WWI5 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17■□□□□ 0.31
SLC44A1Q8WWI5 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC44A1Q8WWI5 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17■□□□□ 0.31
SLC44A1Q8WWI5 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC44A1Q8WWI5 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC44A1Q8WWI5 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC44A1Q8WWI5 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17■□□□□ 0.31
SLC44A1Q8WWI5 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17■□□□□ 0.31
SLC44A1Q8WWI5 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC44A1Q8WWI5 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17■□□□□ 0.31
SLC44A1Q8WWI5 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC44A1Q8WWI5 FXN-203ENST00000396366 922 ntTSL 2 BASIC17■□□□□ 0.31
SLC44A1Q8WWI5 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17■□□□□ 0.31
SLC44A1Q8WWI5 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17■□□□□ 0.31
SLC44A1Q8WWI5 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
SLC44A1Q8WWI5 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17■□□□□ 0.31
SLC44A1Q8WWI5 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17■□□□□ 0.31
SLC44A1Q8WWI5 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17■□□□□ 0.31
SLC44A1Q8WWI5 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
SLC44A1Q8WWI5 AC096582.2-201ENST00000510860 516 ntBASIC17■□□□□ 0.31
SLC44A1Q8WWI5 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17■□□□□ 0.31
SLC44A1Q8WWI5 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17■□□□□ 0.31
SLC44A1Q8WWI5 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
SLC44A1Q8WWI5 AC132872.4-202ENST00000622924 2756 ntBASIC17■□□□□ 0.31
SLC44A1Q8WWI5 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SLC44A1Q8WWI5 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17■□□□□ 0.31
SLC44A1Q8WWI5 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17■□□□□ 0.31
SLC44A1Q8WWI5 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SLC44A1Q8WWI5 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC44A1Q8WWI5 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC44A1Q8WWI5 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SLC44A1Q8WWI5 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC44A1Q8WWI5 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SLC44A1Q8WWI5 AC006277.1-201ENST00000624348 1610 ntBASIC16.99■□□□□ 0.31
SLC44A1Q8WWI5 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
SLC44A1Q8WWI5 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SLC44A1Q8WWI5 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SLC44A1Q8WWI5 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SLC44A1Q8WWI5 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC44A1Q8WWI5 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC44A1Q8WWI5 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC44A1Q8WWI5 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.99■□□□□ 0.31
SLC44A1Q8WWI5 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC44A1Q8WWI5 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC44A1Q8WWI5 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.99■□□□□ 0.31
SLC44A1Q8WWI5 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC44A1Q8WWI5 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC44A1Q8WWI5 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.99■□□□□ 0.31
SLC44A1Q8WWI5 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC44A1Q8WWI5 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.99■□□□□ 0.31
SLC44A1Q8WWI5 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
SLC44A1Q8WWI5 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC44A1Q8WWI5 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC44A1Q8WWI5 LINC00982-205ENST00000420957 435 ntBASIC16.99■□□□□ 0.31
SLC44A1Q8WWI5 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SLC44A1Q8WWI5 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.99■□□□□ 0.31
SLC44A1Q8WWI5 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.99■□□□□ 0.31
SLC44A1Q8WWI5 MINOS1P3-201ENST00000457048 203 ntBASIC16.99■□□□□ 0.31
SLC44A1Q8WWI5 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.99■□□□□ 0.31
SLC44A1Q8WWI5 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.99■□□□□ 0.31
SLC44A1Q8WWI5 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.99■□□□□ 0.31
SLC44A1Q8WWI5 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.99■□□□□ 0.31
SLC44A1Q8WWI5 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.99■□□□□ 0.31
SLC44A1Q8WWI5 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.99■□□□□ 0.31
SLC44A1Q8WWI5 Z69720.1-201ENST00000601483 472 ntBASIC16.99■□□□□ 0.31
SLC44A1Q8WWI5 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.99■□□□□ 0.31
SLC44A1Q8WWI5 AL121956.5-201ENST00000625261 221 ntBASIC16.99■□□□□ 0.31
SLC44A1Q8WWI5 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
SLC44A1Q8WWI5 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC44A1Q8WWI5 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SLC44A1Q8WWI5 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.99■□□□□ 0.31
SLC44A1Q8WWI5 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.99■□□□□ 0.31
SLC44A1Q8WWI5 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SLC44A1Q8WWI5 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC44A1Q8WWI5 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.99■□□□□ 0.31
SLC44A1Q8WWI5 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC44A1Q8WWI5 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
SLC44A1Q8WWI5 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.99■□□□□ 0.31
SLC44A1Q8WWI5 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC44A1Q8WWI5 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SLC44A1Q8WWI5 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SLC44A1Q8WWI5 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms