Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SMARCC2Q8TAQ2 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMARCC2Q8TAQ2 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.85■□□□□ 0.77
SMARCC2Q8TAQ2 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMARCC2Q8TAQ2 UBALD1-205ENST00000590891 2641 ntBASIC19.85■□□□□ 0.77
SMARCC2Q8TAQ2 AC104109.2-201ENST00000602919 1418 ntBASIC19.85■□□□□ 0.77
SMARCC2Q8TAQ2 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SMARCC2Q8TAQ2 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
SMARCC2Q8TAQ2 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC19.84■□□□□ 0.77
SMARCC2Q8TAQ2 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
SMARCC2Q8TAQ2 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMARCC2Q8TAQ2 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SMARCC2Q8TAQ2 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC19.84■□□□□ 0.77
SMARCC2Q8TAQ2 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMARCC2Q8TAQ2 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SMARCC2Q8TAQ2 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMARCC2Q8TAQ2 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SMARCC2Q8TAQ2 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC19.84■□□□□ 0.77
SMARCC2Q8TAQ2 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC19.84■□□□□ 0.77
SMARCC2Q8TAQ2 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SMARCC2Q8TAQ2 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SMARCC2Q8TAQ2 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMARCC2Q8TAQ2 FOS-208ENST00000555686 1496 ntTSL 2 BASIC19.84■□□□□ 0.77
SMARCC2Q8TAQ2 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMARCC2Q8TAQ2 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
SMARCC2Q8TAQ2 AL603756.1-201ENST00000606511 2163 ntBASIC19.84■□□□□ 0.77
SMARCC2Q8TAQ2 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SMARCC2Q8TAQ2 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
SMARCC2Q8TAQ2 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMARCC2Q8TAQ2 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMARCC2Q8TAQ2 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMARCC2Q8TAQ2 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMARCC2Q8TAQ2 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
SMARCC2Q8TAQ2 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.84■□□□□ 0.77
SMARCC2Q8TAQ2 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC19.84■□□□□ 0.77
SMARCC2Q8TAQ2 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SMARCC2Q8TAQ2 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC19.83■□□□□ 0.77
SMARCC2Q8TAQ2 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SMARCC2Q8TAQ2 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SMARCC2Q8TAQ2 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SMARCC2Q8TAQ2 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.83■□□□□ 0.77
SMARCC2Q8TAQ2 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
SMARCC2Q8TAQ2 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.83■□□□□ 0.77
SMARCC2Q8TAQ2 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.83■□□□□ 0.77
SMARCC2Q8TAQ2 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
SMARCC2Q8TAQ2 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
SMARCC2Q8TAQ2 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SMARCC2Q8TAQ2 AP002490.2-201ENST00000524791 560 ntBASIC19.83■□□□□ 0.77
SMARCC2Q8TAQ2 UNC93B6-202ENST00000528242 690 ntBASIC19.83■□□□□ 0.77
SMARCC2Q8TAQ2 AC145285.3-201ENST00000564603 959 ntBASIC19.83■□□□□ 0.77
SMARCC2Q8TAQ2 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
SMARCC2Q8TAQ2 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SMARCC2Q8TAQ2 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SMARCC2Q8TAQ2 Z83851.2-201ENST00000609564 659 ntBASIC19.83■□□□□ 0.77
SMARCC2Q8TAQ2 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC19.83■□□□□ 0.77
SMARCC2Q8TAQ2 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SMARCC2Q8TAQ2 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.83■□□□□ 0.76
SMARCC2Q8TAQ2 HLA-A-202ENST00000376806 1854 ntBASIC19.83■□□□□ 0.76
SMARCC2Q8TAQ2 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SMARCC2Q8TAQ2 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
SMARCC2Q8TAQ2 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
SMARCC2Q8TAQ2 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.83■□□□□ 0.76
SMARCC2Q8TAQ2 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
SMARCC2Q8TAQ2 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SMARCC2Q8TAQ2 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
SMARCC2Q8TAQ2 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SMARCC2Q8TAQ2 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC19.83■□□□□ 0.76
SMARCC2Q8TAQ2 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC19.82■□□□□ 0.76
SMARCC2Q8TAQ2 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
SMARCC2Q8TAQ2 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMARCC2Q8TAQ2 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC19.82■□□□□ 0.76
SMARCC2Q8TAQ2 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMARCC2Q8TAQ2 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SMARCC2Q8TAQ2 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SMARCC2Q8TAQ2 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMARCC2Q8TAQ2 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMARCC2Q8TAQ2 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
SMARCC2Q8TAQ2 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.82■□□□□ 0.76
SMARCC2Q8TAQ2 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SMARCC2Q8TAQ2 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.82■□□□□ 0.76
SMARCC2Q8TAQ2 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.82■□□□□ 0.76
SMARCC2Q8TAQ2 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SMARCC2Q8TAQ2 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19.82■□□□□ 0.76
SMARCC2Q8TAQ2 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SMARCC2Q8TAQ2 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
SMARCC2Q8TAQ2 LINC00895-201ENST00000629028 1637 ntBASIC19.82■□□□□ 0.76
SMARCC2Q8TAQ2 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
SMARCC2Q8TAQ2 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMARCC2Q8TAQ2 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMARCC2Q8TAQ2 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMARCC2Q8TAQ2 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SMARCC2Q8TAQ2 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SMARCC2Q8TAQ2 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SMARCC2Q8TAQ2 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.82■□□□□ 0.76
SMARCC2Q8TAQ2 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMARCC2Q8TAQ2 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SMARCC2Q8TAQ2 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC19.82■□□□□ 0.76
SMARCC2Q8TAQ2 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMARCC2Q8TAQ2 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMARCC2Q8TAQ2 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms