Protein–RNA interactions for Protein: Q8NEE8

TTC16, Tetratricopeptide repeat protein 16, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC16Q8NEE8 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TTC16Q8NEE8 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TTC16Q8NEE8 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TTC16Q8NEE8 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TTC16Q8NEE8 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.82■□□□□ 0.44
TTC16Q8NEE8 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TTC16Q8NEE8 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.82■□□□□ 0.44
TTC16Q8NEE8 AC068880.1-201ENST00000507289 2297 ntBASIC17.82■□□□□ 0.44
TTC16Q8NEE8 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.82■□□□□ 0.44
TTC16Q8NEE8 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TTC16Q8NEE8 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TTC16Q8NEE8 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TTC16Q8NEE8 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.82■□□□□ 0.44
TTC16Q8NEE8 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.82■□□□□ 0.44
TTC16Q8NEE8 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.82■□□□□ 0.44
TTC16Q8NEE8 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.82■□□□□ 0.44
TTC16Q8NEE8 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
TTC16Q8NEE8 AC027796.2-201ENST00000575326 344 ntBASIC17.82■□□□□ 0.44
TTC16Q8NEE8 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TTC16Q8NEE8 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TTC16Q8NEE8 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TTC16Q8NEE8 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TTC16Q8NEE8 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.82■□□□□ 0.44
TTC16Q8NEE8 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TTC16Q8NEE8 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TTC16Q8NEE8 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TTC16Q8NEE8 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TTC16Q8NEE8 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TTC16Q8NEE8 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TTC16Q8NEE8 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.81■□□□□ 0.44
TTC16Q8NEE8 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TTC16Q8NEE8 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
TTC16Q8NEE8 KRT18P28-201ENST00000453838 1332 ntBASIC17.81■□□□□ 0.44
TTC16Q8NEE8 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TTC16Q8NEE8 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TTC16Q8NEE8 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TTC16Q8NEE8 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.81■□□□□ 0.44
TTC16Q8NEE8 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TTC16Q8NEE8 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TTC16Q8NEE8 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.81■□□□□ 0.44
TTC16Q8NEE8 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.81■□□□□ 0.44
TTC16Q8NEE8 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.81■□□□□ 0.44
TTC16Q8NEE8 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
TTC16Q8NEE8 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.81■□□□□ 0.44
TTC16Q8NEE8 AC074386.1-202ENST00000463561 864 ntBASIC17.81■□□□□ 0.44
TTC16Q8NEE8 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.81■□□□□ 0.44
TTC16Q8NEE8 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.81■□□□□ 0.44
TTC16Q8NEE8 AC134043.2-201ENST00000624206 2238 ntBASIC17.81■□□□□ 0.44
TTC16Q8NEE8 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TTC16Q8NEE8 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TTC16Q8NEE8 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TTC16Q8NEE8 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TTC16Q8NEE8 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TTC16Q8NEE8 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TTC16Q8NEE8 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TTC16Q8NEE8 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TTC16Q8NEE8 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TTC16Q8NEE8 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TTC16Q8NEE8 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TTC16Q8NEE8 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TTC16Q8NEE8 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TTC16Q8NEE8 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TTC16Q8NEE8 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TTC16Q8NEE8 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TTC16Q8NEE8 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TTC16Q8NEE8 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TTC16Q8NEE8 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TTC16Q8NEE8 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TTC16Q8NEE8 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TTC16Q8NEE8 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TTC16Q8NEE8 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
TTC16Q8NEE8 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.8■□□□□ 0.44
TTC16Q8NEE8 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.8■□□□□ 0.44
TTC16Q8NEE8 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
TTC16Q8NEE8 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
TTC16Q8NEE8 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TTC16Q8NEE8 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.8■□□□□ 0.44
TTC16Q8NEE8 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
TTC16Q8NEE8 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.8■□□□□ 0.44
TTC16Q8NEE8 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TTC16Q8NEE8 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.8■□□□□ 0.44
TTC16Q8NEE8 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TTC16Q8NEE8 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TTC16Q8NEE8 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.8■□□□□ 0.44
TTC16Q8NEE8 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.8■□□□□ 0.44
TTC16Q8NEE8 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
TTC16Q8NEE8 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TTC16Q8NEE8 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TTC16Q8NEE8 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.79■□□□□ 0.44
TTC16Q8NEE8 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TTC16Q8NEE8 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TTC16Q8NEE8 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TTC16Q8NEE8 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TTC16Q8NEE8 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
TTC16Q8NEE8 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
TTC16Q8NEE8 ELL2P1-201ENST00000413990 1906 ntBASIC17.79■□□□□ 0.44
TTC16Q8NEE8 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TTC16Q8NEE8 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
TTC16Q8NEE8 CNN2P11-201ENST00000429351 262 ntBASIC17.79■□□□□ 0.44
TTC16Q8NEE8 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms