Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 AL353732.1-201ENST00000569618 1459 ntBASIC14.04□□□□□ -0.16
CCDC168Q8NDH2 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC14.04□□□□□ -0.16
CCDC168Q8NDH2 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC168Q8NDH2 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.04□□□□□ -0.16
CCDC168Q8NDH2 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCDC168Q8NDH2 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CCDC168Q8NDH2 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCDC168Q8NDH2 CROCCP3-202ENST00000420820 1947 ntBASIC14.03□□□□□ -0.16
CCDC168Q8NDH2 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CCDC168Q8NDH2 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCDC168Q8NDH2 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCDC168Q8NDH2 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
CCDC168Q8NDH2 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CCDC168Q8NDH2 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCDC168Q8NDH2 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCDC168Q8NDH2 MIR1908-201ENST00000410394 80 ntBASIC14.03□□□□□ -0.16
CCDC168Q8NDH2 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCDC168Q8NDH2 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCDC168Q8NDH2 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC14.03□□□□□ -0.16
CCDC168Q8NDH2 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC14.03□□□□□ -0.16
CCDC168Q8NDH2 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.03□□□□□ -0.16
CCDC168Q8NDH2 BANF1P1-201ENST00000553684 263 ntBASIC14.03□□□□□ -0.16
CCDC168Q8NDH2 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.03□□□□□ -0.16
CCDC168Q8NDH2 MIR8072-201ENST00000614241 80 ntBASIC14.03□□□□□ -0.16
CCDC168Q8NDH2 MIR6727-201ENST00000620702 65 ntBASIC14.03□□□□□ -0.16
CCDC168Q8NDH2 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.03□□□□□ -0.16
CCDC168Q8NDH2 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.03□□□□□ -0.16
CCDC168Q8NDH2 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCDC168Q8NDH2 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC14.03□□□□□ -0.16
CCDC168Q8NDH2 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
CCDC168Q8NDH2 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCDC168Q8NDH2 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCDC168Q8NDH2 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
CCDC168Q8NDH2 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCDC168Q8NDH2 AC116562.4-201ENST00000641316 2276 ntBASIC14.03□□□□□ -0.16
CCDC168Q8NDH2 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCDC168Q8NDH2 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCDC168Q8NDH2 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC14.03□□□□□ -0.16
CCDC168Q8NDH2 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCDC168Q8NDH2 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.03□□□□□ -0.16
CCDC168Q8NDH2 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CCDC168Q8NDH2 AL079307.3-201ENST00000556114 283 ntBASIC14.03□□□□□ -0.16
CCDC168Q8NDH2 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC14.03□□□□□ -0.16
CCDC168Q8NDH2 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC14.03□□□□□ -0.16
CCDC168Q8NDH2 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCDC168Q8NDH2 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCDC168Q8NDH2 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC14.03□□□□□ -0.16
CCDC168Q8NDH2 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CCDC168Q8NDH2 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CCDC168Q8NDH2 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCDC168Q8NDH2 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCDC168Q8NDH2 AC018665.1-201ENST00000622927 1362 ntBASIC14.02□□□□□ -0.16
CCDC168Q8NDH2 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCDC168Q8NDH2 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCDC168Q8NDH2 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CCDC168Q8NDH2 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCDC168Q8NDH2 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC14.02□□□□□ -0.16
CCDC168Q8NDH2 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
CCDC168Q8NDH2 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CCDC168Q8NDH2 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC14.02□□□□□ -0.16
CCDC168Q8NDH2 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
CCDC168Q8NDH2 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCDC168Q8NDH2 BRWD1P1-201ENST00000401091 371 ntBASIC14.02□□□□□ -0.16
CCDC168Q8NDH2 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
CCDC168Q8NDH2 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.02□□□□□ -0.16
CCDC168Q8NDH2 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
CCDC168Q8NDH2 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.02□□□□□ -0.16
CCDC168Q8NDH2 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.02□□□□□ -0.16
CCDC168Q8NDH2 AC243960.2-201ENST00000600996 747 ntBASIC14.02□□□□□ -0.16
CCDC168Q8NDH2 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCDC168Q8NDH2 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC14.02□□□□□ -0.16
CCDC168Q8NDH2 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
CCDC168Q8NDH2 AL035456.1-201ENST00000456064 1369 ntBASIC14.02□□□□□ -0.17
CCDC168Q8NDH2 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
CCDC168Q8NDH2 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCDC168Q8NDH2 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CCDC168Q8NDH2 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC14.02□□□□□ -0.17
CCDC168Q8NDH2 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.02□□□□□ -0.17
CCDC168Q8NDH2 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CCDC168Q8NDH2 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCDC168Q8NDH2 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCDC168Q8NDH2 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCDC168Q8NDH2 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CCDC168Q8NDH2 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.02□□□□□ -0.17
CCDC168Q8NDH2 DOC2GP-202ENST00000514950 1163 ntBASIC14.02□□□□□ -0.17
CCDC168Q8NDH2 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCDC168Q8NDH2 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.02□□□□□ -0.17
CCDC168Q8NDH2 AC073389.1-201ENST00000595595 795 ntBASIC14.02□□□□□ -0.17
CCDC168Q8NDH2 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CCDC168Q8NDH2 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CCDC168Q8NDH2 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CCDC168Q8NDH2 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCDC168Q8NDH2 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC14.02□□□□□ -0.17
CCDC168Q8NDH2 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCDC168Q8NDH2 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
CCDC168Q8NDH2 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC168Q8NDH2 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
CCDC168Q8NDH2 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC14.01□□□□□ -0.17
CCDC168Q8NDH2 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC168Q8NDH2 SLC22A20-204ENST00000530038 1673 ntBASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms