Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
C11orf42Q8N5U0 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
C11orf42Q8N5U0 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
C11orf42Q8N5U0 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
C11orf42Q8N5U0 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.17□□□□□ -0.14
C11orf42Q8N5U0 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
C11orf42Q8N5U0 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
C11orf42Q8N5U0 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
C11orf42Q8N5U0 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
C11orf42Q8N5U0 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
C11orf42Q8N5U0 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
C11orf42Q8N5U0 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
C11orf42Q8N5U0 AL590787.1-201ENST00000568856 1315 ntBASIC14.16□□□□□ -0.14
C11orf42Q8N5U0 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
C11orf42Q8N5U0 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.16□□□□□ -0.14
C11orf42Q8N5U0 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
C11orf42Q8N5U0 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
C11orf42Q8N5U0 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
C11orf42Q8N5U0 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
C11orf42Q8N5U0 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
C11orf42Q8N5U0 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
C11orf42Q8N5U0 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
C11orf42Q8N5U0 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
C11orf42Q8N5U0 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
C11orf42Q8N5U0 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
C11orf42Q8N5U0 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.16□□□□□ -0.14
C11orf42Q8N5U0 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.16□□□□□ -0.14
C11orf42Q8N5U0 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
C11orf42Q8N5U0 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
C11orf42Q8N5U0 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.16□□□□□ -0.14
C11orf42Q8N5U0 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
C11orf42Q8N5U0 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.16□□□□□ -0.14
C11orf42Q8N5U0 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.16□□□□□ -0.14
C11orf42Q8N5U0 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.16□□□□□ -0.14
C11orf42Q8N5U0 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.16□□□□□ -0.14
C11orf42Q8N5U0 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.16□□□□□ -0.14
C11orf42Q8N5U0 KLK8-205ENST00000593490 267 ntTSL 3 BASIC14.16□□□□□ -0.14
C11orf42Q8N5U0 MIR7706-201ENST00000613747 67 ntBASIC14.16□□□□□ -0.14
C11orf42Q8N5U0 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.16□□□□□ -0.14
C11orf42Q8N5U0 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.16□□□□□ -0.14
C11orf42Q8N5U0 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
C11orf42Q8N5U0 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
C11orf42Q8N5U0 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
C11orf42Q8N5U0 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
C11orf42Q8N5U0 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
C11orf42Q8N5U0 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
C11orf42Q8N5U0 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
C11orf42Q8N5U0 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.16□□□□□ -0.14
C11orf42Q8N5U0 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
C11orf42Q8N5U0 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
C11orf42Q8N5U0 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
C11orf42Q8N5U0 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC14.16□□□□□ -0.14
C11orf42Q8N5U0 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
C11orf42Q8N5U0 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.15□□□□□ -0.14
C11orf42Q8N5U0 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
C11orf42Q8N5U0 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
C11orf42Q8N5U0 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC14.15□□□□□ -0.14
C11orf42Q8N5U0 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
C11orf42Q8N5U0 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
C11orf42Q8N5U0 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
C11orf42Q8N5U0 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
C11orf42Q8N5U0 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.15□□□□□ -0.14
C11orf42Q8N5U0 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
C11orf42Q8N5U0 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
C11orf42Q8N5U0 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
C11orf42Q8N5U0 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
C11orf42Q8N5U0 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.15□□□□□ -0.14
C11orf42Q8N5U0 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
C11orf42Q8N5U0 AC103702.1-201ENST00000548801 2630 ntBASIC14.15□□□□□ -0.14
C11orf42Q8N5U0 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
C11orf42Q8N5U0 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
C11orf42Q8N5U0 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
C11orf42Q8N5U0 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
C11orf42Q8N5U0 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
C11orf42Q8N5U0 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
C11orf42Q8N5U0 AC006504.4-201ENST00000592118 1568 ntBASIC14.15□□□□□ -0.14
C11orf42Q8N5U0 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
C11orf42Q8N5U0 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.15□□□□□ -0.14
C11orf42Q8N5U0 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
C11orf42Q8N5U0 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.15□□□□□ -0.14
C11orf42Q8N5U0 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
C11orf42Q8N5U0 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.15□□□□□ -0.14
C11orf42Q8N5U0 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.15□□□□□ -0.14
C11orf42Q8N5U0 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.15□□□□□ -0.14
C11orf42Q8N5U0 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.15□□□□□ -0.14
C11orf42Q8N5U0 AP001005.1-201ENST00000571755 1248 ntBASIC14.15□□□□□ -0.14
C11orf42Q8N5U0 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.15□□□□□ -0.14
C11orf42Q8N5U0 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
C11orf42Q8N5U0 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
C11orf42Q8N5U0 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
C11orf42Q8N5U0 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC14.15□□□□□ -0.14
C11orf42Q8N5U0 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
C11orf42Q8N5U0 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
C11orf42Q8N5U0 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
C11orf42Q8N5U0 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
C11orf42Q8N5U0 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
C11orf42Q8N5U0 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.15□□□□□ -0.14
C11orf42Q8N5U0 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
C11orf42Q8N5U0 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
C11orf42Q8N5U0 AL023806.1-201ENST00000603994 1649 ntBASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms