Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.38■□□□□ 0.21
KRT78Q8N1N4 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.38■□□□□ 0.21
KRT78Q8N1N4 PI4KAP1-204ENST00000612579 1703 ntBASIC16.38■□□□□ 0.21
KRT78Q8N1N4 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.38■□□□□ 0.21
KRT78Q8N1N4 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT78Q8N1N4 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
KRT78Q8N1N4 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.38■□□□□ 0.21
KRT78Q8N1N4 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT78Q8N1N4 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
KRT78Q8N1N4 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
KRT78Q8N1N4 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT78Q8N1N4 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.38■□□□□ 0.21
KRT78Q8N1N4 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.38■□□□□ 0.21
KRT78Q8N1N4 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
KRT78Q8N1N4 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
KRT78Q8N1N4 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
KRT78Q8N1N4 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.38■□□□□ 0.21
KRT78Q8N1N4 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
KRT78Q8N1N4 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
KRT78Q8N1N4 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
KRT78Q8N1N4 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.37■□□□□ 0.21
KRT78Q8N1N4 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
KRT78Q8N1N4 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.37■□□□□ 0.21
KRT78Q8N1N4 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
KRT78Q8N1N4 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.37■□□□□ 0.21
KRT78Q8N1N4 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
KRT78Q8N1N4 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.37■□□□□ 0.21
KRT78Q8N1N4 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
KRT78Q8N1N4 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
KRT78Q8N1N4 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.37■□□□□ 0.21
KRT78Q8N1N4 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.37■□□□□ 0.21
KRT78Q8N1N4 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.37■□□□□ 0.21
KRT78Q8N1N4 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.37■□□□□ 0.21
KRT78Q8N1N4 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.37■□□□□ 0.21
KRT78Q8N1N4 AC105339.3-201ENST00000560043 636 ntBASIC16.37■□□□□ 0.21
KRT78Q8N1N4 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.37■□□□□ 0.21
KRT78Q8N1N4 GGTLC5P-201ENST00000617623 998 ntBASIC16.37■□□□□ 0.21
KRT78Q8N1N4 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
KRT78Q8N1N4 AL031008.1-201ENST00000619963 541 ntBASIC16.37■□□□□ 0.21
KRT78Q8N1N4 PGM5P2-202ENST00000637225 1043 ntBASIC16.37■□□□□ 0.21
KRT78Q8N1N4 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.37■□□□□ 0.21
KRT78Q8N1N4 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
KRT78Q8N1N4 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
KRT78Q8N1N4 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
KRT78Q8N1N4 PCDHA12-202ENST00000613593 2588 ntBASIC16.37■□□□□ 0.21
KRT78Q8N1N4 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
KRT78Q8N1N4 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
KRT78Q8N1N4 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.37■□□□□ 0.21
KRT78Q8N1N4 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
KRT78Q8N1N4 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
KRT78Q8N1N4 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
KRT78Q8N1N4 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
KRT78Q8N1N4 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
KRT78Q8N1N4 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
KRT78Q8N1N4 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.37■□□□□ 0.21
KRT78Q8N1N4 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
KRT78Q8N1N4 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.37■□□□□ 0.21
KRT78Q8N1N4 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
KRT78Q8N1N4 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
KRT78Q8N1N4 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
KRT78Q8N1N4 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
KRT78Q8N1N4 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
KRT78Q8N1N4 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.36■□□□□ 0.21
KRT78Q8N1N4 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
KRT78Q8N1N4 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
KRT78Q8N1N4 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
KRT78Q8N1N4 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
KRT78Q8N1N4 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.36■□□□□ 0.21
KRT78Q8N1N4 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
KRT78Q8N1N4 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.36■□□□□ 0.21
KRT78Q8N1N4 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
KRT78Q8N1N4 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
KRT78Q8N1N4 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
KRT78Q8N1N4 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.36■□□□□ 0.21
KRT78Q8N1N4 KRT18P27-201ENST00000427733 1299 ntBASIC16.36■□□□□ 0.21
KRT78Q8N1N4 PAWRP1-201ENST00000451083 565 ntBASIC16.36■□□□□ 0.21
KRT78Q8N1N4 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.36■□□□□ 0.21
KRT78Q8N1N4 AL160237.2-201ENST00000556165 472 ntBASIC16.36■□□□□ 0.21
KRT78Q8N1N4 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.36■□□□□ 0.21
KRT78Q8N1N4 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.36■□□□□ 0.21
KRT78Q8N1N4 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
KRT78Q8N1N4 AL773604.1-201ENST00000617417 272 ntBASIC16.36■□□□□ 0.21
KRT78Q8N1N4 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.36■□□□□ 0.21
KRT78Q8N1N4 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
KRT78Q8N1N4 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
KRT78Q8N1N4 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
KRT78Q8N1N4 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
KRT78Q8N1N4 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
KRT78Q8N1N4 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
KRT78Q8N1N4 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
KRT78Q8N1N4 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
KRT78Q8N1N4 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
KRT78Q8N1N4 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.36■□□□□ 0.21
KRT78Q8N1N4 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
KRT78Q8N1N4 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
KRT78Q8N1N4 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
KRT78Q8N1N4 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
KRT78Q8N1N4 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
KRT78Q8N1N4 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
KRT78Q8N1N4 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms