Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NPAS3Q8IXF0 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NPAS3Q8IXF0 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPAS3Q8IXF0 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.47■□□□□ 0.39
NPAS3Q8IXF0 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NPAS3Q8IXF0 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NPAS3Q8IXF0 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.47■□□□□ 0.39
NPAS3Q8IXF0 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NPAS3Q8IXF0 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NPAS3Q8IXF0 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
NPAS3Q8IXF0 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.46■□□□□ 0.39
NPAS3Q8IXF0 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.46■□□□□ 0.39
NPAS3Q8IXF0 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
NPAS3Q8IXF0 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NPAS3Q8IXF0 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC17.46■□□□□ 0.39
NPAS3Q8IXF0 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.46■□□□□ 0.39
NPAS3Q8IXF0 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.46■□□□□ 0.39
NPAS3Q8IXF0 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.46■□□□□ 0.39
NPAS3Q8IXF0 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NPAS3Q8IXF0 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.46■□□□□ 0.39
NPAS3Q8IXF0 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.46■□□□□ 0.39
NPAS3Q8IXF0 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
NPAS3Q8IXF0 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
NPAS3Q8IXF0 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NPAS3Q8IXF0 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NPAS3Q8IXF0 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
NPAS3Q8IXF0 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NPAS3Q8IXF0 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NPAS3Q8IXF0 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
NPAS3Q8IXF0 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPAS3Q8IXF0 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.45■□□□□ 0.38
NPAS3Q8IXF0 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPAS3Q8IXF0 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.45■□□□□ 0.38
NPAS3Q8IXF0 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPAS3Q8IXF0 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPAS3Q8IXF0 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.45■□□□□ 0.38
NPAS3Q8IXF0 AC131009.4-201ENST00000624048 1740 ntBASIC17.45■□□□□ 0.38
NPAS3Q8IXF0 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.45■□□□□ 0.38
NPAS3Q8IXF0 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
NPAS3Q8IXF0 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.45■□□□□ 0.38
NPAS3Q8IXF0 SLC25A1P3-201ENST00000395415 828 ntBASIC17.45■□□□□ 0.38
NPAS3Q8IXF0 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.45■□□□□ 0.38
NPAS3Q8IXF0 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NPAS3Q8IXF0 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.45■□□□□ 0.38
NPAS3Q8IXF0 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.45■□□□□ 0.38
NPAS3Q8IXF0 AC092580.3-201ENST00000430932 139 ntBASIC17.45■□□□□ 0.38
NPAS3Q8IXF0 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.45■□□□□ 0.38
NPAS3Q8IXF0 AL512638.1-201ENST00000457493 794 ntBASIC17.45■□□□□ 0.38
NPAS3Q8IXF0 MPDU1-223ENST00000582151 728 ntBASIC17.45■□□□□ 0.38
NPAS3Q8IXF0 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.45■□□□□ 0.38
NPAS3Q8IXF0 AP001350.2-201ENST00000625104 1094 ntBASIC17.45■□□□□ 0.38
NPAS3Q8IXF0 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.45■□□□□ 0.38
NPAS3Q8IXF0 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPAS3Q8IXF0 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.45■□□□□ 0.38
NPAS3Q8IXF0 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPAS3Q8IXF0 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
NPAS3Q8IXF0 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
NPAS3Q8IXF0 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPAS3Q8IXF0 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.45■□□□□ 0.38
NPAS3Q8IXF0 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPAS3Q8IXF0 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPAS3Q8IXF0 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
NPAS3Q8IXF0 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPAS3Q8IXF0 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
NPAS3Q8IXF0 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.45■□□□□ 0.38
NPAS3Q8IXF0 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.45■□□□□ 0.38
NPAS3Q8IXF0 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPAS3Q8IXF0 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
NPAS3Q8IXF0 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPAS3Q8IXF0 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NPAS3Q8IXF0 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
NPAS3Q8IXF0 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
NPAS3Q8IXF0 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPAS3Q8IXF0 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NPAS3Q8IXF0 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPAS3Q8IXF0 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPAS3Q8IXF0 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.44■□□□□ 0.38
NPAS3Q8IXF0 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPAS3Q8IXF0 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
NPAS3Q8IXF0 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NPAS3Q8IXF0 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NPAS3Q8IXF0 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPAS3Q8IXF0 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPAS3Q8IXF0 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
NPAS3Q8IXF0 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
NPAS3Q8IXF0 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPAS3Q8IXF0 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPAS3Q8IXF0 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NPAS3Q8IXF0 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
NPAS3Q8IXF0 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.44■□□□□ 0.38
NPAS3Q8IXF0 AC005225.4-201ENST00000557330 545 ntBASIC17.44■□□□□ 0.38
NPAS3Q8IXF0 AL138918.1-201ENST00000568306 659 ntBASIC17.44■□□□□ 0.38
NPAS3Q8IXF0 MIR4453-201ENST00000584019 89 ntBASIC17.44■□□□□ 0.38
NPAS3Q8IXF0 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.44■□□□□ 0.38
NPAS3Q8IXF0 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPAS3Q8IXF0 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.44■□□□□ 0.38
NPAS3Q8IXF0 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPAS3Q8IXF0 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPAS3Q8IXF0 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NPAS3Q8IXF0 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms