Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.84■□□□□ 0.45
SCN4BQ8IWT1 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.84■□□□□ 0.45
SCN4BQ8IWT1 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.84■□□□□ 0.45
SCN4BQ8IWT1 AP006288.1-201ENST00000446065 395 ntBASIC17.84■□□□□ 0.45
SCN4BQ8IWT1 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.84■□□□□ 0.45
SCN4BQ8IWT1 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.84■□□□□ 0.45
SCN4BQ8IWT1 AC112191.1-201ENST00000523689 701 ntBASIC17.84■□□□□ 0.45
SCN4BQ8IWT1 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.84■□□□□ 0.45
SCN4BQ8IWT1 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.84■□□□□ 0.45
SCN4BQ8IWT1 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.84■□□□□ 0.45
SCN4BQ8IWT1 AC092902.6-201ENST00000641783 218 ntBASIC17.84■□□□□ 0.45
SCN4BQ8IWT1 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCN4BQ8IWT1 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SCN4BQ8IWT1 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCN4BQ8IWT1 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.84■□□□□ 0.45
SCN4BQ8IWT1 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCN4BQ8IWT1 AC139713.2-201ENST00000641328 2723 ntBASIC17.84■□□□□ 0.45
SCN4BQ8IWT1 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCN4BQ8IWT1 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SCN4BQ8IWT1 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.83■□□□□ 0.45
SCN4BQ8IWT1 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SCN4BQ8IWT1 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SCN4BQ8IWT1 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.45
SCN4BQ8IWT1 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
SCN4BQ8IWT1 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SCN4BQ8IWT1 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SCN4BQ8IWT1 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
SCN4BQ8IWT1 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
SCN4BQ8IWT1 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.45
SCN4BQ8IWT1 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
SCN4BQ8IWT1 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SCN4BQ8IWT1 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SCN4BQ8IWT1 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SCN4BQ8IWT1 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SCN4BQ8IWT1 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SCN4BQ8IWT1 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.83■□□□□ 0.44
SCN4BQ8IWT1 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
SCN4BQ8IWT1 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.83■□□□□ 0.44
SCN4BQ8IWT1 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.83■□□□□ 0.44
SCN4BQ8IWT1 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.83■□□□□ 0.44
SCN4BQ8IWT1 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.83■□□□□ 0.44
SCN4BQ8IWT1 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.83■□□□□ 0.44
SCN4BQ8IWT1 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SCN4BQ8IWT1 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.83■□□□□ 0.44
SCN4BQ8IWT1 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.83■□□□□ 0.44
SCN4BQ8IWT1 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.83■□□□□ 0.44
SCN4BQ8IWT1 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SCN4BQ8IWT1 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SCN4BQ8IWT1 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
SCN4BQ8IWT1 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SCN4BQ8IWT1 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SCN4BQ8IWT1 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.83■□□□□ 0.44
SCN4BQ8IWT1 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SCN4BQ8IWT1 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.82■□□□□ 0.44
SCN4BQ8IWT1 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SCN4BQ8IWT1 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SCN4BQ8IWT1 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.82■□□□□ 0.44
SCN4BQ8IWT1 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
SCN4BQ8IWT1 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SCN4BQ8IWT1 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.82■□□□□ 0.44
SCN4BQ8IWT1 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SCN4BQ8IWT1 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SCN4BQ8IWT1 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SCN4BQ8IWT1 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SCN4BQ8IWT1 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.82■□□□□ 0.44
SCN4BQ8IWT1 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SCN4BQ8IWT1 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SCN4BQ8IWT1 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.82■□□□□ 0.44
SCN4BQ8IWT1 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SCN4BQ8IWT1 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
SCN4BQ8IWT1 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SCN4BQ8IWT1 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.82■□□□□ 0.44
SCN4BQ8IWT1 AC002056.1-201ENST00000395613 760 ntBASIC17.82■□□□□ 0.44
SCN4BQ8IWT1 HMGA1P7-201ENST00000406908 502 ntBASIC17.82■□□□□ 0.44
SCN4BQ8IWT1 ACTG1P14-201ENST00000446382 1122 ntBASIC17.82■□□□□ 0.44
SCN4BQ8IWT1 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SCN4BQ8IWT1 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SCN4BQ8IWT1 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
SCN4BQ8IWT1 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.82■□□□□ 0.44
SCN4BQ8IWT1 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SCN4BQ8IWT1 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SCN4BQ8IWT1 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.82■□□□□ 0.44
SCN4BQ8IWT1 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.82■□□□□ 0.44
SCN4BQ8IWT1 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SCN4BQ8IWT1 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SCN4BQ8IWT1 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SCN4BQ8IWT1 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.82■□□□□ 0.44
SCN4BQ8IWT1 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SCN4BQ8IWT1 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SCN4BQ8IWT1 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SCN4BQ8IWT1 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SCN4BQ8IWT1 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SCN4BQ8IWT1 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SCN4BQ8IWT1 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
SCN4BQ8IWT1 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SCN4BQ8IWT1 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SCN4BQ8IWT1 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SCN4BQ8IWT1 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SCN4BQ8IWT1 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SCN4BQ8IWT1 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms