Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.35□□□□□ -0.11
RAI1Q7Z5J4 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAI1Q7Z5J4 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.35□□□□□ -0.11
RAI1Q7Z5J4 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RAI1Q7Z5J4 AC008267.7-201ENST00000624570 1194 ntBASIC14.35□□□□□ -0.11
RAI1Q7Z5J4 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC14.35□□□□□ -0.11
RAI1Q7Z5J4 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC14.35□□□□□ -0.11
RAI1Q7Z5J4 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAI1Q7Z5J4 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.35□□□□□ -0.11
RAI1Q7Z5J4 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC14.34□□□□□ -0.11
RAI1Q7Z5J4 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAI1Q7Z5J4 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC14.34□□□□□ -0.11
RAI1Q7Z5J4 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAI1Q7Z5J4 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAI1Q7Z5J4 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAI1Q7Z5J4 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.34□□□□□ -0.11
RAI1Q7Z5J4 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAI1Q7Z5J4 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAI1Q7Z5J4 FO538757.1-201ENST00000623083 1397 ntBASIC14.34□□□□□ -0.11
RAI1Q7Z5J4 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAI1Q7Z5J4 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAI1Q7Z5J4 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAI1Q7Z5J4 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
RAI1Q7Z5J4 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.34□□□□□ -0.11
RAI1Q7Z5J4 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.34□□□□□ -0.11
RAI1Q7Z5J4 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.34□□□□□ -0.11
RAI1Q7Z5J4 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAI1Q7Z5J4 AC004890.2-204ENST00000481968 304 ntBASIC14.34□□□□□ -0.11
RAI1Q7Z5J4 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.34□□□□□ -0.11
RAI1Q7Z5J4 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.34□□□□□ -0.11
RAI1Q7Z5J4 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.34□□□□□ -0.11
RAI1Q7Z5J4 MIR4745-201ENST00000577608 62 ntBASIC14.34□□□□□ -0.11
RAI1Q7Z5J4 AC091167.2-201ENST00000579581 588 ntBASIC14.34□□□□□ -0.11
RAI1Q7Z5J4 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.34□□□□□ -0.11
RAI1Q7Z5J4 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
RAI1Q7Z5J4 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAI1Q7Z5J4 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
RAI1Q7Z5J4 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAI1Q7Z5J4 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAI1Q7Z5J4 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAI1Q7Z5J4 AL023806.1-201ENST00000603994 1649 ntBASIC14.34□□□□□ -0.11
RAI1Q7Z5J4 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAI1Q7Z5J4 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAI1Q7Z5J4 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAI1Q7Z5J4 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAI1Q7Z5J4 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
RAI1Q7Z5J4 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
RAI1Q7Z5J4 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RAI1Q7Z5J4 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
RAI1Q7Z5J4 TSSK5P-201ENST00000423978 907 ntBASIC14.33□□□□□ -0.11
RAI1Q7Z5J4 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
RAI1Q7Z5J4 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.33□□□□□ -0.11
RAI1Q7Z5J4 AC097493.3-201ENST00000509725 367 ntBASIC14.33□□□□□ -0.11
RAI1Q7Z5J4 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.33□□□□□ -0.11
RAI1Q7Z5J4 AC190387.1-201ENST00000551683 408 ntBASIC14.33□□□□□ -0.11
RAI1Q7Z5J4 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
RAI1Q7Z5J4 AC027307.2-201ENST00000591252 911 ntBASIC14.33□□□□□ -0.11
RAI1Q7Z5J4 AL035252.4-201ENST00000624174 288 ntBASIC14.33□□□□□ -0.11
RAI1Q7Z5J4 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.11
RAI1Q7Z5J4 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAI1Q7Z5J4 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
RAI1Q7Z5J4 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAI1Q7Z5J4 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAI1Q7Z5J4 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAI1Q7Z5J4 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAI1Q7Z5J4 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAI1Q7Z5J4 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RAI1Q7Z5J4 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC14.33□□□□□ -0.12
RAI1Q7Z5J4 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
RAI1Q7Z5J4 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAI1Q7Z5J4 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAI1Q7Z5J4 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.33□□□□□ -0.12
RAI1Q7Z5J4 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAI1Q7Z5J4 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC14.33□□□□□ -0.12
RAI1Q7Z5J4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAI1Q7Z5J4 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAI1Q7Z5J4 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAI1Q7Z5J4 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC14.33□□□□□ -0.12
RAI1Q7Z5J4 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAI1Q7Z5J4 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RAI1Q7Z5J4 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAI1Q7Z5J4 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.33□□□□□ -0.12
RAI1Q7Z5J4 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAI1Q7Z5J4 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAI1Q7Z5J4 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAI1Q7Z5J4 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC14.33□□□□□ -0.12
RAI1Q7Z5J4 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAI1Q7Z5J4 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.33□□□□□ -0.12
RAI1Q7Z5J4 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAI1Q7Z5J4 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAI1Q7Z5J4 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAI1Q7Z5J4 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.33□□□□□ -0.12
RAI1Q7Z5J4 WBP2-203ENST00000433525 928 ntTSL 2 BASIC14.33□□□□□ -0.12
RAI1Q7Z5J4 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.33□□□□□ -0.12
RAI1Q7Z5J4 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAI1Q7Z5J4 RNA5SP421-201ENST00000516864 134 ntBASIC14.33□□□□□ -0.12
RAI1Q7Z5J4 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.33□□□□□ -0.12
RAI1Q7Z5J4 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAI1Q7Z5J4 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC14.33□□□□□ -0.12
RAI1Q7Z5J4 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms