Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RFWD3Q6PCD5 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.68■□□□□ 0.42
RFWD3Q6PCD5 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFWD3Q6PCD5 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
RFWD3Q6PCD5 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RFWD3Q6PCD5 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.68■□□□□ 0.42
RFWD3Q6PCD5 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RFWD3Q6PCD5 AC023274.1-201ENST00000418278 595 ntBASIC17.68■□□□□ 0.42
RFWD3Q6PCD5 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
RFWD3Q6PCD5 PAWRP1-201ENST00000451083 565 ntBASIC17.68■□□□□ 0.42
RFWD3Q6PCD5 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
RFWD3Q6PCD5 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.68■□□□□ 0.42
RFWD3Q6PCD5 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.68■□□□□ 0.42
RFWD3Q6PCD5 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.68■□□□□ 0.42
RFWD3Q6PCD5 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.68■□□□□ 0.42
RFWD3Q6PCD5 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.68■□□□□ 0.42
RFWD3Q6PCD5 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.68■□□□□ 0.42
RFWD3Q6PCD5 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.68■□□□□ 0.42
RFWD3Q6PCD5 AC010654.1-201ENST00000615722 808 ntBASIC17.68■□□□□ 0.42
RFWD3Q6PCD5 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RFWD3Q6PCD5 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFWD3Q6PCD5 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFWD3Q6PCD5 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RFWD3Q6PCD5 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFWD3Q6PCD5 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RFWD3Q6PCD5 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFWD3Q6PCD5 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFWD3Q6PCD5 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFWD3Q6PCD5 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFWD3Q6PCD5 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.67■□□□□ 0.42
RFWD3Q6PCD5 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RFWD3Q6PCD5 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
RFWD3Q6PCD5 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFWD3Q6PCD5 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.67■□□□□ 0.42
RFWD3Q6PCD5 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFWD3Q6PCD5 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RFWD3Q6PCD5 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFWD3Q6PCD5 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFWD3Q6PCD5 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFWD3Q6PCD5 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFWD3Q6PCD5 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.67■□□□□ 0.42
RFWD3Q6PCD5 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.67■□□□□ 0.42
RFWD3Q6PCD5 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
RFWD3Q6PCD5 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RFWD3Q6PCD5 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RFWD3Q6PCD5 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFWD3Q6PCD5 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFWD3Q6PCD5 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFWD3Q6PCD5 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
RFWD3Q6PCD5 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.67■□□□□ 0.42
RFWD3Q6PCD5 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.67■□□□□ 0.42
RFWD3Q6PCD5 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.67■□□□□ 0.42
RFWD3Q6PCD5 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.67■□□□□ 0.42
RFWD3Q6PCD5 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.67■□□□□ 0.42
RFWD3Q6PCD5 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFWD3Q6PCD5 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFWD3Q6PCD5 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFWD3Q6PCD5 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.67■□□□□ 0.42
RFWD3Q6PCD5 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFWD3Q6PCD5 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFWD3Q6PCD5 AC116353.5-201ENST00000638148 1699 ntBASIC17.67■□□□□ 0.42
RFWD3Q6PCD5 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFWD3Q6PCD5 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFWD3Q6PCD5 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFWD3Q6PCD5 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFWD3Q6PCD5 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
RFWD3Q6PCD5 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFWD3Q6PCD5 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFWD3Q6PCD5 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFWD3Q6PCD5 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.66■□□□□ 0.42
RFWD3Q6PCD5 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.66■□□□□ 0.42
RFWD3Q6PCD5 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RFWD3Q6PCD5 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.66■□□□□ 0.42
RFWD3Q6PCD5 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
RFWD3Q6PCD5 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.66■□□□□ 0.42
RFWD3Q6PCD5 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RFWD3Q6PCD5 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RFWD3Q6PCD5 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
RFWD3Q6PCD5 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RFWD3Q6PCD5 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFWD3Q6PCD5 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RFWD3Q6PCD5 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
RFWD3Q6PCD5 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.66■□□□□ 0.42
RFWD3Q6PCD5 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFWD3Q6PCD5 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.66■□□□□ 0.42
RFWD3Q6PCD5 AC087163.2-201ENST00000457299 853 ntBASIC17.66■□□□□ 0.42
RFWD3Q6PCD5 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.66■□□□□ 0.42
RFWD3Q6PCD5 SLC25A6P2-201ENST00000497974 877 ntBASIC17.66■□□□□ 0.42
RFWD3Q6PCD5 AC092865.5-201ENST00000545435 363 ntBASIC17.66■□□□□ 0.42
RFWD3Q6PCD5 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RFWD3Q6PCD5 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.66■□□□□ 0.42
RFWD3Q6PCD5 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RFWD3Q6PCD5 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFWD3Q6PCD5 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFWD3Q6PCD5 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RFWD3Q6PCD5 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RFWD3Q6PCD5 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFWD3Q6PCD5 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RFWD3Q6PCD5 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RFWD3Q6PCD5 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms