Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.05■□□□□ 0.48
CNKSR3Q6P9H4 SERF2-217ENST00000630046 862 ntTSL 5 BASIC18.05■□□□□ 0.48
CNKSR3Q6P9H4 AC004840.1-201ENST00000636359 365 ntBASIC18.05■□□□□ 0.48
CNKSR3Q6P9H4 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.05■□□□□ 0.48
CNKSR3Q6P9H4 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNKSR3Q6P9H4 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CNKSR3Q6P9H4 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CNKSR3Q6P9H4 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.05■□□□□ 0.48
CNKSR3Q6P9H4 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNKSR3Q6P9H4 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CNKSR3Q6P9H4 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNKSR3Q6P9H4 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.05■□□□□ 0.48
CNKSR3Q6P9H4 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CNKSR3Q6P9H4 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CNKSR3Q6P9H4 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.04■□□□□ 0.48
CNKSR3Q6P9H4 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CNKSR3Q6P9H4 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CNKSR3Q6P9H4 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CNKSR3Q6P9H4 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CNKSR3Q6P9H4 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.04■□□□□ 0.48
CNKSR3Q6P9H4 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CNKSR3Q6P9H4 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CNKSR3Q6P9H4 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CNKSR3Q6P9H4 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CNKSR3Q6P9H4 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CNKSR3Q6P9H4 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CNKSR3Q6P9H4 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
CNKSR3Q6P9H4 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CNKSR3Q6P9H4 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CNKSR3Q6P9H4 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CNKSR3Q6P9H4 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.04■□□□□ 0.48
CNKSR3Q6P9H4 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC18.04■□□□□ 0.48
CNKSR3Q6P9H4 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC18.04■□□□□ 0.48
CNKSR3Q6P9H4 AC105021.1-202ENST00000570572 669 ntBASIC18.04■□□□□ 0.48
CNKSR3Q6P9H4 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC18.04■□□□□ 0.48
CNKSR3Q6P9H4 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CNKSR3Q6P9H4 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CNKSR3Q6P9H4 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CNKSR3Q6P9H4 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CNKSR3Q6P9H4 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CNKSR3Q6P9H4 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CNKSR3Q6P9H4 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CNKSR3Q6P9H4 AC073439.1-201ENST00000624121 1774 ntBASIC18.04■□□□□ 0.48
CNKSR3Q6P9H4 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CNKSR3Q6P9H4 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CNKSR3Q6P9H4 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CNKSR3Q6P9H4 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.03■□□□□ 0.48
CNKSR3Q6P9H4 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.03■□□□□ 0.48
CNKSR3Q6P9H4 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CNKSR3Q6P9H4 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CNKSR3Q6P9H4 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CNKSR3Q6P9H4 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CNKSR3Q6P9H4 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CNKSR3Q6P9H4 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.03■□□□□ 0.48
CNKSR3Q6P9H4 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
CNKSR3Q6P9H4 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CNKSR3Q6P9H4 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CNKSR3Q6P9H4 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CNKSR3Q6P9H4 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CNKSR3Q6P9H4 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CNKSR3Q6P9H4 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.03■□□□□ 0.48
CNKSR3Q6P9H4 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.03■□□□□ 0.48
CNKSR3Q6P9H4 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC18.03■□□□□ 0.48
CNKSR3Q6P9H4 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC18.03■□□□□ 0.48
CNKSR3Q6P9H4 AC098859.1-201ENST00000502915 1238 ntBASIC18.03■□□□□ 0.48
CNKSR3Q6P9H4 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.03■□□□□ 0.48
CNKSR3Q6P9H4 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC18.03■□□□□ 0.48
CNKSR3Q6P9H4 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.03■□□□□ 0.48
CNKSR3Q6P9H4 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.03■□□□□ 0.48
CNKSR3Q6P9H4 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.03■□□□□ 0.48
CNKSR3Q6P9H4 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC18.03■□□□□ 0.48
CNKSR3Q6P9H4 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.03■□□□□ 0.48
CNKSR3Q6P9H4 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.03■□□□□ 0.48
CNKSR3Q6P9H4 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CNKSR3Q6P9H4 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CNKSR3Q6P9H4 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CNKSR3Q6P9H4 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CNKSR3Q6P9H4 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CNKSR3Q6P9H4 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CNKSR3Q6P9H4 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.03■□□□□ 0.48
CNKSR3Q6P9H4 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.03■□□□□ 0.48
CNKSR3Q6P9H4 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CNKSR3Q6P9H4 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CNKSR3Q6P9H4 AC116353.5-201ENST00000638148 1699 ntBASIC18.03■□□□□ 0.48
CNKSR3Q6P9H4 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CNKSR3Q6P9H4 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.02■□□□□ 0.48
CNKSR3Q6P9H4 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CNKSR3Q6P9H4 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CNKSR3Q6P9H4 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CNKSR3Q6P9H4 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CNKSR3Q6P9H4 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC18.02■□□□□ 0.48
CNKSR3Q6P9H4 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.02■□□□□ 0.48
CNKSR3Q6P9H4 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
CNKSR3Q6P9H4 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CNKSR3Q6P9H4 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CNKSR3Q6P9H4 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CNKSR3Q6P9H4 IGHV3-71-201ENST00000523324 359 ntBASIC18.02■□□□□ 0.48
CNKSR3Q6P9H4 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.02■□□□□ 0.48
CNKSR3Q6P9H4 AC135586.1-201ENST00000539323 574 ntBASIC18.02■□□□□ 0.48
CNKSR3Q6P9H4 BANF1P1-201ENST00000553684 263 ntBASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms