Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VARS2Q5ST30 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VARS2Q5ST30 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VARS2Q5ST30 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
VARS2Q5ST30 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VARS2Q5ST30 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
VARS2Q5ST30 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.88■□□□□ 0.45
VARS2Q5ST30 PMS2P4-201ENST00000412466 1052 ntBASIC17.88■□□□□ 0.45
VARS2Q5ST30 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.88■□□□□ 0.45
VARS2Q5ST30 KRT18P32-201ENST00000424695 1287 ntBASIC17.88■□□□□ 0.45
VARS2Q5ST30 FAM58DP-201ENST00000428076 619 ntBASIC17.88■□□□□ 0.45
VARS2Q5ST30 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.88■□□□□ 0.45
VARS2Q5ST30 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VARS2Q5ST30 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.88■□□□□ 0.45
VARS2Q5ST30 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
VARS2Q5ST30 MIR3909-201ENST00000579518 119 ntBASIC17.88■□□□□ 0.45
VARS2Q5ST30 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
VARS2Q5ST30 AL096865.1-201ENST00000606796 927 ntBASIC17.88■□□□□ 0.45
VARS2Q5ST30 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
VARS2Q5ST30 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
VARS2Q5ST30 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VARS2Q5ST30 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
VARS2Q5ST30 PP12613-201ENST00000424958 2230 ntBASIC17.88■□□□□ 0.45
VARS2Q5ST30 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.88■□□□□ 0.45
VARS2Q5ST30 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VARS2Q5ST30 WASH6P-202ENST00000359512 1437 ntBASIC17.88■□□□□ 0.45
VARS2Q5ST30 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.88■□□□□ 0.45
VARS2Q5ST30 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.88■□□□□ 0.45
VARS2Q5ST30 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VARS2Q5ST30 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
VARS2Q5ST30 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
VARS2Q5ST30 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.87■□□□□ 0.45
VARS2Q5ST30 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VARS2Q5ST30 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
VARS2Q5ST30 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
VARS2Q5ST30 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VARS2Q5ST30 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.87■□□□□ 0.45
VARS2Q5ST30 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
VARS2Q5ST30 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
VARS2Q5ST30 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VARS2Q5ST30 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VARS2Q5ST30 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.87■□□□□ 0.45
VARS2Q5ST30 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
VARS2Q5ST30 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VARS2Q5ST30 AC124947.2-201ENST00000547118 1133 ntBASIC17.87■□□□□ 0.45
VARS2Q5ST30 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.87■□□□□ 0.45
VARS2Q5ST30 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.87■□□□□ 0.45
VARS2Q5ST30 MIR4492-201ENST00000581627 80 ntBASIC17.87■□□□□ 0.45
VARS2Q5ST30 CYP2A7P1-201ENST00000595391 815 ntBASIC17.87■□□□□ 0.45
VARS2Q5ST30 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
VARS2Q5ST30 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
VARS2Q5ST30 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VARS2Q5ST30 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VARS2Q5ST30 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.87■□□□□ 0.45
VARS2Q5ST30 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
VARS2Q5ST30 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VARS2Q5ST30 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
VARS2Q5ST30 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
VARS2Q5ST30 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.87■□□□□ 0.45
VARS2Q5ST30 PCDHB18P-201ENST00000524813 2368 ntBASIC17.87■□□□□ 0.45
VARS2Q5ST30 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VARS2Q5ST30 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VARS2Q5ST30 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VARS2Q5ST30 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VARS2Q5ST30 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
VARS2Q5ST30 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VARS2Q5ST30 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VARS2Q5ST30 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VARS2Q5ST30 AC092053.1-201ENST00000605787 1936 ntBASIC17.86■□□□□ 0.45
VARS2Q5ST30 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
VARS2Q5ST30 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VARS2Q5ST30 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VARS2Q5ST30 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
VARS2Q5ST30 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VARS2Q5ST30 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VARS2Q5ST30 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.86■□□□□ 0.45
VARS2Q5ST30 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VARS2Q5ST30 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
VARS2Q5ST30 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.86■□□□□ 0.45
VARS2Q5ST30 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VARS2Q5ST30 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.86■□□□□ 0.45
VARS2Q5ST30 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.86■□□□□ 0.45
VARS2Q5ST30 BCRP1-201ENST00000444246 691 ntBASIC17.86■□□□□ 0.45
VARS2Q5ST30 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
VARS2Q5ST30 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VARS2Q5ST30 IGHV3-62-201ENST00000520057 340 ntBASIC17.86■□□□□ 0.45
VARS2Q5ST30 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.86■□□□□ 0.45
VARS2Q5ST30 LINC01225-203ENST00000563550 1244 ntBASIC17.86■□□□□ 0.45
VARS2Q5ST30 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.86■□□□□ 0.45
VARS2Q5ST30 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.86■□□□□ 0.45
VARS2Q5ST30 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.86■□□□□ 0.45
VARS2Q5ST30 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.86■□□□□ 0.45
VARS2Q5ST30 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
VARS2Q5ST30 AC093512.1-201ENST00000617969 520 ntBASIC17.86■□□□□ 0.45
VARS2Q5ST30 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VARS2Q5ST30 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.86■□□□□ 0.45
VARS2Q5ST30 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.86■□□□□ 0.45
VARS2Q5ST30 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VARS2Q5ST30 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VARS2Q5ST30 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms