Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC067863.1-201ENST00000494933 530 ntBASIC19.64■□□□□ 0.73
SHROOM1Q2M3G4 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC19.64■□□□□ 0.73
SHROOM1Q2M3G4 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC19.64■□□□□ 0.73
SHROOM1Q2M3G4 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC19.64■□□□□ 0.73
SHROOM1Q2M3G4 MIR6080-201ENST00000617359 66 ntBASIC19.64■□□□□ 0.73
SHROOM1Q2M3G4 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
SHROOM1Q2M3G4 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SHROOM1Q2M3G4 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SHROOM1Q2M3G4 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SHROOM1Q2M3G4 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
SHROOM1Q2M3G4 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SHROOM1Q2M3G4 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC19.64■□□□□ 0.73
SHROOM1Q2M3G4 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SHROOM1Q2M3G4 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC19.64■□□□□ 0.73
SHROOM1Q2M3G4 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SHROOM1Q2M3G4 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SHROOM1Q2M3G4 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SHROOM1Q2M3G4 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC19.64■□□□□ 0.73
SHROOM1Q2M3G4 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SHROOM1Q2M3G4 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.63■□□□□ 0.73
SHROOM1Q2M3G4 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.63■□□□□ 0.73
SHROOM1Q2M3G4 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC19.63■□□□□ 0.73
SHROOM1Q2M3G4 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHROOM1Q2M3G4 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.63■□□□□ 0.73
SHROOM1Q2M3G4 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC19.63■□□□□ 0.73
SHROOM1Q2M3G4 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHROOM1Q2M3G4 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHROOM1Q2M3G4 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
SHROOM1Q2M3G4 CDK2AP2P3-201ENST00000422476 372 ntBASIC19.63■□□□□ 0.73
SHROOM1Q2M3G4 AC107890.1-201ENST00000422478 521 ntBASIC19.63■□□□□ 0.73
SHROOM1Q2M3G4 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC19.63■□□□□ 0.73
SHROOM1Q2M3G4 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHROOM1Q2M3G4 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC19.63■□□□□ 0.73
SHROOM1Q2M3G4 GREM1-201ENST00000560677 623 ntTSL 4 BASIC19.63■□□□□ 0.73
SHROOM1Q2M3G4 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC19.63■□□□□ 0.73
SHROOM1Q2M3G4 NAA60-208ENST00000570819 833 ntTSL 2 BASIC19.63■□□□□ 0.73
SHROOM1Q2M3G4 MIR4453-201ENST00000584019 89 ntBASIC19.63■□□□□ 0.73
SHROOM1Q2M3G4 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SHROOM1Q2M3G4 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SHROOM1Q2M3G4 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC19.63■□□□□ 0.73
SHROOM1Q2M3G4 AL390754.1-201ENST00000619088 582 ntBASIC19.63■□□□□ 0.73
SHROOM1Q2M3G4 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHROOM1Q2M3G4 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHROOM1Q2M3G4 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHROOM1Q2M3G4 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHROOM1Q2M3G4 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHROOM1Q2M3G4 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SHROOM1Q2M3G4 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHROOM1Q2M3G4 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.63■□□□□ 0.73
SHROOM1Q2M3G4 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19.63■□□□□ 0.73
SHROOM1Q2M3G4 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
SHROOM1Q2M3G4 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.63■□□□□ 0.73
SHROOM1Q2M3G4 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC19.63■□□□□ 0.73
SHROOM1Q2M3G4 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SHROOM1Q2M3G4 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHROOM1Q2M3G4 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHROOM1Q2M3G4 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
SHROOM1Q2M3G4 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.62■□□□□ 0.73
SHROOM1Q2M3G4 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SHROOM1Q2M3G4 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHROOM1Q2M3G4 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHROOM1Q2M3G4 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC19.62■□□□□ 0.73
SHROOM1Q2M3G4 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHROOM1Q2M3G4 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC19.62■□□□□ 0.73
SHROOM1Q2M3G4 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHROOM1Q2M3G4 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHROOM1Q2M3G4 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SHROOM1Q2M3G4 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC19.62■□□□□ 0.73
SHROOM1Q2M3G4 AC142381.1-201ENST00000426099 345 ntBASIC19.62■□□□□ 0.73
SHROOM1Q2M3G4 AC092580.3-201ENST00000430932 139 ntBASIC19.62■□□□□ 0.73
SHROOM1Q2M3G4 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SHROOM1Q2M3G4 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC19.62■□□□□ 0.73
SHROOM1Q2M3G4 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC19.62■□□□□ 0.73
SHROOM1Q2M3G4 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC19.62■□□□□ 0.73
SHROOM1Q2M3G4 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC19.62■□□□□ 0.73
SHROOM1Q2M3G4 MIR3909-201ENST00000579518 119 ntBASIC19.62■□□□□ 0.73
SHROOM1Q2M3G4 NKG7-205ENST00000600427 520 ntTSL 3 BASIC19.62■□□□□ 0.73
SHROOM1Q2M3G4 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SHROOM1Q2M3G4 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHROOM1Q2M3G4 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHROOM1Q2M3G4 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.62■□□□□ 0.73
SHROOM1Q2M3G4 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHROOM1Q2M3G4 SNX33P1-201ENST00000592116 1762 ntBASIC19.62■□□□□ 0.73
SHROOM1Q2M3G4 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC19.62■□□□□ 0.73
SHROOM1Q2M3G4 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SHROOM1Q2M3G4 PCDHB17P-201ENST00000539533 2393 ntBASIC19.62■□□□□ 0.73
SHROOM1Q2M3G4 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHROOM1Q2M3G4 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SHROOM1Q2M3G4 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SHROOM1Q2M3G4 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHROOM1Q2M3G4 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHROOM1Q2M3G4 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHROOM1Q2M3G4 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
SHROOM1Q2M3G4 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHROOM1Q2M3G4 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHROOM1Q2M3G4 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SHROOM1Q2M3G4 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHROOM1Q2M3G4 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SHROOM1Q2M3G4 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHROOM1Q2M3G4 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms