Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC14.42□□□□□ -0.1
EFNB3Q15768 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
EFNB3Q15768 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
EFNB3Q15768 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
EFNB3Q15768 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
EFNB3Q15768 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
EFNB3Q15768 HMGA1P7-201ENST00000406908 502 ntBASIC14.42□□□□□ -0.1
EFNB3Q15768 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
EFNB3Q15768 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.42□□□□□ -0.1
EFNB3Q15768 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.42□□□□□ -0.1
EFNB3Q15768 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
EFNB3Q15768 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
EFNB3Q15768 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
EFNB3Q15768 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.42□□□□□ -0.1
EFNB3Q15768 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.42□□□□□ -0.1
EFNB3Q15768 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.42□□□□□ -0.1
EFNB3Q15768 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.42□□□□□ -0.1
EFNB3Q15768 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.42□□□□□ -0.1
EFNB3Q15768 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.42□□□□□ -0.1
EFNB3Q15768 AL596442.2-201ENST00000610240 980 ntBASIC14.42□□□□□ -0.1
EFNB3Q15768 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
EFNB3Q15768 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
EFNB3Q15768 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
EFNB3Q15768 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
EFNB3Q15768 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
EFNB3Q15768 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.42□□□□□ -0.1
EFNB3Q15768 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
EFNB3Q15768 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC14.42□□□□□ -0.1
EFNB3Q15768 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
EFNB3Q15768 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
EFNB3Q15768 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
EFNB3Q15768 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC14.42□□□□□ -0.1
EFNB3Q15768 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
EFNB3Q15768 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
EFNB3Q15768 KRT8P49-201ENST00000604166 1432 ntBASIC14.41□□□□□ -0.1
EFNB3Q15768 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
EFNB3Q15768 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC14.41□□□□□ -0.1
EFNB3Q15768 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
EFNB3Q15768 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.41□□□□□ -0.1
EFNB3Q15768 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
EFNB3Q15768 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
EFNB3Q15768 LINC02012-201ENST00000608206 1725 ntBASIC14.41□□□□□ -0.1
EFNB3Q15768 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.41□□□□□ -0.1
EFNB3Q15768 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC14.41□□□□□ -0.1
EFNB3Q15768 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
EFNB3Q15768 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
EFNB3Q15768 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.41□□□□□ -0.1
EFNB3Q15768 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
EFNB3Q15768 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
EFNB3Q15768 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.41□□□□□ -0.1
EFNB3Q15768 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
EFNB3Q15768 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
EFNB3Q15768 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.41□□□□□ -0.1
EFNB3Q15768 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
EFNB3Q15768 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
EFNB3Q15768 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.41□□□□□ -0.1
EFNB3Q15768 FAM86C2P-203ENST00000528684 1004 ntBASIC14.41□□□□□ -0.1
EFNB3Q15768 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
EFNB3Q15768 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
EFNB3Q15768 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
EFNB3Q15768 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.41□□□□□ -0.1
EFNB3Q15768 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.41□□□□□ -0.1
EFNB3Q15768 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.41□□□□□ -0.1
EFNB3Q15768 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
EFNB3Q15768 AP001350.2-201ENST00000625104 1094 ntBASIC14.41□□□□□ -0.1
EFNB3Q15768 AL513210.1-201ENST00000629608 234 ntBASIC14.41□□□□□ -0.1
EFNB3Q15768 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
EFNB3Q15768 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
EFNB3Q15768 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
EFNB3Q15768 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
EFNB3Q15768 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
EFNB3Q15768 AC108860.2-201ENST00000562760 2183 ntBASIC14.41□□□□□ -0.1
EFNB3Q15768 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
EFNB3Q15768 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
EFNB3Q15768 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC14.41□□□□□ -0.1
EFNB3Q15768 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
EFNB3Q15768 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
EFNB3Q15768 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
EFNB3Q15768 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC14.41□□□□□ -0.1
EFNB3Q15768 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC14.41□□□□□ -0.1
EFNB3Q15768 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
EFNB3Q15768 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
EFNB3Q15768 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
EFNB3Q15768 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
EFNB3Q15768 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC14.41□□□□□ -0.1
EFNB3Q15768 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
EFNB3Q15768 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
EFNB3Q15768 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
EFNB3Q15768 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
EFNB3Q15768 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
EFNB3Q15768 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
EFNB3Q15768 AC080080.1-201ENST00000625121 2420 ntBASIC14.4□□□□□ -0.1
EFNB3Q15768 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
EFNB3Q15768 AC106820.2-201ENST00000563775 3264 ntBASIC14.4□□□□□ -0.1
EFNB3Q15768 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
EFNB3Q15768 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
EFNB3Q15768 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
EFNB3Q15768 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.4□□□□□ -0.1
EFNB3Q15768 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.4□□□□□ -0.1
EFNB3Q15768 ADH5P3-201ENST00000433842 1137 ntBASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms