Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 RN7SL606P-201ENST00000472779 293 ntBASIC14.71□□□□□ -0.05
UBA52P62987 BET1L-206ENST00000486280 665 ntTSL 3 BASIC14.71□□□□□ -0.05
UBA52P62987 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
UBA52P62987 ABR-217ENST00000572441 563 ntTSL 4 BASIC14.71□□□□□ -0.05
UBA52P62987 NAT14-202ENST00000587400 416 ntTSL 5 BASIC14.71□□□□□ -0.05
UBA52P62987 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC14.71□□□□□ -0.05
UBA52P62987 AC064862.7-201ENST00000604520 867 ntBASIC14.71□□□□□ -0.05
UBA52P62987 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
UBA52P62987 BX640515.1-201ENST00000617215 977 ntBASIC14.71□□□□□ -0.05
UBA52P62987 REXO1L6P-202ENST00000619970 1078 ntBASIC14.71□□□□□ -0.05
UBA52P62987 CCNC-219ENST00000627680 896 ntTSL 5 BASIC14.71□□□□□ -0.05
UBA52P62987 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC14.71□□□□□ -0.05
UBA52P62987 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
UBA52P62987 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.71□□□□□ -0.05
UBA52P62987 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.71□□□□□ -0.05
UBA52P62987 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC14.71□□□□□ -0.05
UBA52P62987 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC14.71□□□□□ -0.05
UBA52P62987 AL136379.1-201ENST00000623471 2642 ntBASIC14.71□□□□□ -0.06
UBA52P62987 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
UBA52P62987 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
UBA52P62987 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
UBA52P62987 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
UBA52P62987 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.71□□□□□ -0.06
UBA52P62987 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.71□□□□□ -0.06
UBA52P62987 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
UBA52P62987 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.71□□□□□ -0.06
UBA52P62987 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.71□□□□□ -0.06
UBA52P62987 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
UBA52P62987 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
UBA52P62987 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
UBA52P62987 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC14.7□□□□□ -0.06
UBA52P62987 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
UBA52P62987 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
UBA52P62987 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
UBA52P62987 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
UBA52P62987 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
UBA52P62987 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
UBA52P62987 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
UBA52P62987 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.7□□□□□ -0.06
UBA52P62987 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.7□□□□□ -0.06
UBA52P62987 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
UBA52P62987 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
UBA52P62987 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
UBA52P62987 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC14.7□□□□□ -0.06
UBA52P62987 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
UBA52P62987 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
UBA52P62987 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.7□□□□□ -0.06
UBA52P62987 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC14.7□□□□□ -0.06
UBA52P62987 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.7□□□□□ -0.06
UBA52P62987 AC023824.1-201ENST00000562945 2975 ntBASIC14.7□□□□□ -0.06
UBA52P62987 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC14.7□□□□□ -0.06
UBA52P62987 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.7□□□□□ -0.06
UBA52P62987 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
UBA52P62987 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
UBA52P62987 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.7□□□□□ -0.06
UBA52P62987 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
UBA52P62987 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC14.7□□□□□ -0.06
UBA52P62987 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
UBA52P62987 CYP51A1P1-201ENST00000492267 1507 ntBASIC14.7□□□□□ -0.06
UBA52P62987 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC14.7□□□□□ -0.06
UBA52P62987 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
UBA52P62987 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC14.7□□□□□ -0.06
UBA52P62987 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
UBA52P62987 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
UBA52P62987 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
UBA52P62987 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
UBA52P62987 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
UBA52P62987 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
UBA52P62987 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
UBA52P62987 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC14.7□□□□□ -0.06
UBA52P62987 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
UBA52P62987 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.69□□□□□ -0.06
UBA52P62987 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.69□□□□□ -0.06
UBA52P62987 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
UBA52P62987 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.69□□□□□ -0.06
UBA52P62987 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
UBA52P62987 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
UBA52P62987 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UBA52P62987 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UBA52P62987 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
UBA52P62987 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UBA52P62987 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
UBA52P62987 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
UBA52P62987 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UBA52P62987 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UBA52P62987 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
UBA52P62987 AP000593.1-201ENST00000393668 712 ntBASIC14.69□□□□□ -0.06
UBA52P62987 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.69□□□□□ -0.06
UBA52P62987 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.69□□□□□ -0.06
UBA52P62987 MINOS1P3-201ENST00000457048 203 ntBASIC14.69□□□□□ -0.06
UBA52P62987 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UBA52P62987 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.69□□□□□ -0.06
UBA52P62987 REEP1-209ENST00000541910 969 ntTSL 2 BASIC14.69□□□□□ -0.06
UBA52P62987 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UBA52P62987 AC011840.4-201ENST00000578471 627 ntBASIC14.69□□□□□ -0.06
UBA52P62987 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.69□□□□□ -0.06
UBA52P62987 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
UBA52P62987 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
UBA52P62987 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
UBA52P62987 AC060834.1-201ENST00000443027 2032 ntBASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms