Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SEC61A1P61619 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC14.91□□□□□ -0.02
SEC61A1P61619 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SEC61A1P61619 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SEC61A1P61619 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC14.91□□□□□ -0.02
SEC61A1P61619 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
SEC61A1P61619 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
SEC61A1P61619 FLJ16779-201ENST00000612722 7638 ntBASIC14.91□□□□□ -0.02
SEC61A1P61619 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SEC61A1P61619 AC004870.1-201ENST00000315132 882 ntBASIC14.91□□□□□ -0.02
SEC61A1P61619 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.91□□□□□ -0.02
SEC61A1P61619 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC14.91□□□□□ -0.02
SEC61A1P61619 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SEC61A1P61619 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
SEC61A1P61619 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SEC61A1P61619 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
SEC61A1P61619 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14.91□□□□□ -0.02
SEC61A1P61619 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC14.91□□□□□ -0.02
SEC61A1P61619 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SEC61A1P61619 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.91□□□□□ -0.02
SEC61A1P61619 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SEC61A1P61619 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SEC61A1P61619 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
SEC61A1P61619 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.91□□□□□ -0.02
SEC61A1P61619 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SEC61A1P61619 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SEC61A1P61619 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SEC61A1P61619 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SEC61A1P61619 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SEC61A1P61619 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SEC61A1P61619 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SEC61A1P61619 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SEC61A1P61619 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SEC61A1P61619 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SEC61A1P61619 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
SEC61A1P61619 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SEC61A1P61619 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SEC61A1P61619 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
SEC61A1P61619 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SEC61A1P61619 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SEC61A1P61619 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.9□□□□□ -0.02
SEC61A1P61619 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SEC61A1P61619 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC14.9□□□□□ -0.02
SEC61A1P61619 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SEC61A1P61619 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
SEC61A1P61619 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.9□□□□□ -0.02
SEC61A1P61619 AC006449.5-201ENST00000610658 2098 ntBASIC14.9□□□□□ -0.02
SEC61A1P61619 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SEC61A1P61619 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SEC61A1P61619 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SEC61A1P61619 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.9□□□□□ -0.02
SEC61A1P61619 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SEC61A1P61619 AC112698.1-201ENST00000510299 916 ntBASIC14.9□□□□□ -0.02
SEC61A1P61619 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC14.9□□□□□ -0.02
SEC61A1P61619 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SEC61A1P61619 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC14.9□□□□□ -0.02
SEC61A1P61619 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC14.9□□□□□ -0.02
SEC61A1P61619 LINC01451-201ENST00000623792 534 ntBASIC14.9□□□□□ -0.02
SEC61A1P61619 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SEC61A1P61619 LINC00304-203ENST00000565008 1864 ntBASIC14.9□□□□□ -0.02
SEC61A1P61619 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SEC61A1P61619 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SEC61A1P61619 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
SEC61A1P61619 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SEC61A1P61619 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.9□□□□□ -0.02
SEC61A1P61619 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.9□□□□□ -0.02
SEC61A1P61619 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SEC61A1P61619 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.9□□□□□ -0.02
SEC61A1P61619 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SEC61A1P61619 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SEC61A1P61619 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.9□□□□□ -0.02
SEC61A1P61619 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SEC61A1P61619 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SEC61A1P61619 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.9□□□□□ -0.02
SEC61A1P61619 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
SEC61A1P61619 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC14.89□□□□□ -0.03
SEC61A1P61619 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SEC61A1P61619 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SEC61A1P61619 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SEC61A1P61619 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC14.89□□□□□ -0.03
SEC61A1P61619 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
SEC61A1P61619 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SEC61A1P61619 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.89□□□□□ -0.03
SEC61A1P61619 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SEC61A1P61619 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SEC61A1P61619 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14.89□□□□□ -0.03
SEC61A1P61619 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC14.89□□□□□ -0.03
SEC61A1P61619 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC14.89□□□□□ -0.03
SEC61A1P61619 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SEC61A1P61619 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SEC61A1P61619 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SEC61A1P61619 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.89□□□□□ -0.03
SEC61A1P61619 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SEC61A1P61619 AKR1C7P-201ENST00000305623 895 ntBASIC14.89□□□□□ -0.03
SEC61A1P61619 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SEC61A1P61619 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SEC61A1P61619 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SEC61A1P61619 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SEC61A1P61619 AC079781.3-201ENST00000449110 356 ntBASIC14.89□□□□□ -0.03
SEC61A1P61619 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms