Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
SPCS3P61009 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SPCS3P61009 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SPCS3P61009 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC13.86□□□□□ -0.19
SPCS3P61009 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
SPCS3P61009 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
SPCS3P61009 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SPCS3P61009 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SPCS3P61009 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
SPCS3P61009 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SPCS3P61009 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
SPCS3P61009 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SPCS3P61009 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC13.86□□□□□ -0.19
SPCS3P61009 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SPCS3P61009 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SPCS3P61009 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SPCS3P61009 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SPCS3P61009 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SPCS3P61009 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SPCS3P61009 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SPCS3P61009 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SPCS3P61009 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SPCS3P61009 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC13.85□□□□□ -0.19
SPCS3P61009 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SPCS3P61009 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SPCS3P61009 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
SPCS3P61009 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SPCS3P61009 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SPCS3P61009 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SPCS3P61009 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC13.85□□□□□ -0.19
SPCS3P61009 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SPCS3P61009 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SPCS3P61009 AL049757.1-201ENST00000616842 1596 ntBASIC13.85□□□□□ -0.19
SPCS3P61009 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SPCS3P61009 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SPCS3P61009 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC13.85□□□□□ -0.19
SPCS3P61009 AL137013.1-201ENST00000432946 1228 ntBASIC13.85□□□□□ -0.19
SPCS3P61009 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC13.85□□□□□ -0.19
SPCS3P61009 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SPCS3P61009 AP002490.2-201ENST00000524791 560 ntBASIC13.85□□□□□ -0.19
SPCS3P61009 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SPCS3P61009 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SPCS3P61009 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SPCS3P61009 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
SPCS3P61009 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SPCS3P61009 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SPCS3P61009 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SPCS3P61009 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SPCS3P61009 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
SPCS3P61009 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SPCS3P61009 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC13.85□□□□□ -0.19
SPCS3P61009 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SPCS3P61009 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC13.85□□□□□ -0.19
SPCS3P61009 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
SPCS3P61009 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
SPCS3P61009 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
SPCS3P61009 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SPCS3P61009 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SPCS3P61009 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
SPCS3P61009 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
SPCS3P61009 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC13.84□□□□□ -0.19
SPCS3P61009 ACE-204ENST00000428043 5120 ntTSL 2 BASIC13.84□□□□□ -0.19
SPCS3P61009 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC13.84□□□□□ -0.19
SPCS3P61009 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
SPCS3P61009 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SPCS3P61009 AC125634.1-201ENST00000438758 1403 ntBASIC13.84□□□□□ -0.19
SPCS3P61009 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.84□□□□□ -0.19
SPCS3P61009 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
SPCS3P61009 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SPCS3P61009 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC13.84□□□□□ -0.19
SPCS3P61009 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SPCS3P61009 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SPCS3P61009 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SPCS3P61009 FAM220CP-201ENST00000395253 831 ntBASIC13.84□□□□□ -0.19
SPCS3P61009 TSPY5P-201ENST00000426936 936 ntBASIC13.84□□□□□ -0.19
SPCS3P61009 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC13.84□□□□□ -0.19
SPCS3P61009 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SPCS3P61009 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SPCS3P61009 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC13.84□□□□□ -0.19
SPCS3P61009 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
SPCS3P61009 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC13.84□□□□□ -0.19
SPCS3P61009 STK25P1-201ENST00000585406 838 ntBASIC13.84□□□□□ -0.19
SPCS3P61009 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC13.84□□□□□ -0.19
SPCS3P61009 AC005363.2-201ENST00000618631 242 ntBASIC13.84□□□□□ -0.19
SPCS3P61009 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SPCS3P61009 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC13.84□□□□□ -0.19
SPCS3P61009 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SPCS3P61009 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SPCS3P61009 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SPCS3P61009 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SPCS3P61009 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SPCS3P61009 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
SPCS3P61009 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
SPCS3P61009 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
SPCS3P61009 CICP4-201ENST00000447359 2812 ntBASIC13.84□□□□□ -0.19
SPCS3P61009 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC13.84□□□□□ -0.19
SPCS3P61009 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC13.84□□□□□ -0.19
SPCS3P61009 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SPCS3P61009 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SPCS3P61009 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms