Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RHBDL3P58872 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RHBDL3P58872 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RHBDL3P58872 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
RHBDL3P58872 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RHBDL3P58872 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.87■□□□□ 0.77
RHBDL3P58872 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC19.87■□□□□ 0.77
RHBDL3P58872 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RHBDL3P58872 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RHBDL3P58872 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
RHBDL3P58872 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RHBDL3P58872 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RHBDL3P58872 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC19.86■□□□□ 0.77
RHBDL3P58872 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
RHBDL3P58872 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
RHBDL3P58872 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC19.86■□□□□ 0.77
RHBDL3P58872 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RHBDL3P58872 BAD-202ENST00000394531 631 ntTSL 3 BASIC19.86■□□□□ 0.77
RHBDL3P58872 CENPM-205ENST00000404067 905 ntTSL 3 BASIC19.86■□□□□ 0.77
RHBDL3P58872 AL035633.1-201ENST00000406139 838 ntBASIC19.86■□□□□ 0.77
RHBDL3P58872 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RHBDL3P58872 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC19.86■□□□□ 0.77
RHBDL3P58872 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC19.86■□□□□ 0.77
RHBDL3P58872 BAD-207ENST00000544785 525 ntTSL 3 BASIC19.86■□□□□ 0.77
RHBDL3P58872 AJ011932.1-201ENST00000621707 465 ntBASIC19.86■□□□□ 0.77
RHBDL3P58872 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC19.86■□□□□ 0.77
RHBDL3P58872 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.86■□□□□ 0.77
RHBDL3P58872 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RHBDL3P58872 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RHBDL3P58872 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RHBDL3P58872 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RHBDL3P58872 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
RHBDL3P58872 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
RHBDL3P58872 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RHBDL3P58872 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
RHBDL3P58872 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
RHBDL3P58872 PC-204ENST00000524491 1714 ntTSL 2 BASIC19.85■□□□□ 0.77
RHBDL3P58872 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
RHBDL3P58872 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
RHBDL3P58872 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
RHBDL3P58872 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
RHBDL3P58872 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RHBDL3P58872 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RHBDL3P58872 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RHBDL3P58872 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RHBDL3P58872 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC19.85■□□□□ 0.77
RHBDL3P58872 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC19.85■□□□□ 0.77
RHBDL3P58872 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC19.85■□□□□ 0.77
RHBDL3P58872 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.85■□□□□ 0.77
RHBDL3P58872 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC19.85■□□□□ 0.77
RHBDL3P58872 LHX6-205ENST00000464484 666 ntTSL 2 BASIC19.85■□□□□ 0.77
RHBDL3P58872 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RHBDL3P58872 MIR4453-201ENST00000584019 89 ntBASIC19.85■□□□□ 0.77
RHBDL3P58872 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC19.85■□□□□ 0.77
RHBDL3P58872 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC19.85■□□□□ 0.77
RHBDL3P58872 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC19.85■□□□□ 0.77
RHBDL3P58872 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RHBDL3P58872 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19.85■□□□□ 0.77
RHBDL3P58872 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.85■□□□□ 0.77
RHBDL3P58872 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
RHBDL3P58872 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
RHBDL3P58872 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.85■□□□□ 0.77
RHBDL3P58872 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RHBDL3P58872 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC19.85■□□□□ 0.77
RHBDL3P58872 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RHBDL3P58872 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RHBDL3P58872 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.84■□□□□ 0.77
RHBDL3P58872 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.84■□□□□ 0.77
RHBDL3P58872 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.84■□□□□ 0.77
RHBDL3P58872 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RHBDL3P58872 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RHBDL3P58872 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC19.84■□□□□ 0.77
RHBDL3P58872 AP3S2-216ENST00000617003 1561 ntBASIC19.84■□□□□ 0.77
RHBDL3P58872 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RHBDL3P58872 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RHBDL3P58872 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RHBDL3P58872 AC092580.3-201ENST00000430932 139 ntBASIC19.84■□□□□ 0.77
RHBDL3P58872 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RHBDL3P58872 UGT1A2P-201ENST00000454886 866 ntBASIC19.84■□□□□ 0.77
RHBDL3P58872 RNA5SP421-201ENST00000516864 134 ntBASIC19.84■□□□□ 0.77
RHBDL3P58872 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC19.84■□□□□ 0.77
RHBDL3P58872 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC19.84■□□□□ 0.77
RHBDL3P58872 RARRES2P9-201ENST00000565168 469 ntBASIC19.84■□□□□ 0.77
RHBDL3P58872 MIR4745-201ENST00000577608 62 ntBASIC19.84■□□□□ 0.77
RHBDL3P58872 COQ4-205ENST00000609948 956 ntTSL 2 BASIC19.84■□□□□ 0.77
RHBDL3P58872 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RHBDL3P58872 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RHBDL3P58872 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RHBDL3P58872 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RHBDL3P58872 KRT8P39-201ENST00000396270 1433 ntBASIC19.84■□□□□ 0.77
RHBDL3P58872 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.84■□□□□ 0.77
RHBDL3P58872 AL023806.1-201ENST00000603994 1649 ntBASIC19.84■□□□□ 0.77
RHBDL3P58872 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.77
RHBDL3P58872 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RHBDL3P58872 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RHBDL3P58872 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
RHBDL3P58872 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
RHBDL3P58872 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RHBDL3P58872 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RHBDL3P58872 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms