Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 AC138932.2-201ENST00000548268 1459 ntBASIC18.51■□□□□ 0.55
ACLYP53396 AC126755.4-201ENST00000549796 1459 ntBASIC18.51■□□□□ 0.55
ACLYP53396 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.51■□□□□ 0.55
ACLYP53396 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ACLYP53396 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
ACLYP53396 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.51■□□□□ 0.55
ACLYP53396 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
ACLYP53396 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ACLYP53396 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ACLYP53396 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.5■□□□□ 0.55
ACLYP53396 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ACLYP53396 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
ACLYP53396 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
ACLYP53396 FRMD8P1-201ENST00000440433 1524 ntBASIC18.5■□□□□ 0.55
ACLYP53396 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC18.5■□□□□ 0.55
ACLYP53396 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ACLYP53396 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ACLYP53396 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.5■□□□□ 0.55
ACLYP53396 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ACLYP53396 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ACLYP53396 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ACLYP53396 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
ACLYP53396 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ACLYP53396 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.5■□□□□ 0.55
ACLYP53396 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ACLYP53396 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC18.5■□□□□ 0.55
ACLYP53396 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC18.5■□□□□ 0.55
ACLYP53396 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ACLYP53396 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC18.5■□□□□ 0.55
ACLYP53396 RN7SL828P-201ENST00000607615 303 ntBASIC18.5■□□□□ 0.55
ACLYP53396 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC18.5■□□□□ 0.55
ACLYP53396 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.5■□□□□ 0.55
ACLYP53396 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.5■□□□□ 0.55
ACLYP53396 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.5■□□□□ 0.55
ACLYP53396 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.5■□□□□ 0.55
ACLYP53396 AC004840.1-201ENST00000636359 365 ntBASIC18.5■□□□□ 0.55
ACLYP53396 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.5■□□□□ 0.55
ACLYP53396 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.5■□□□□ 0.55
ACLYP53396 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ACLYP53396 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ACLYP53396 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
ACLYP53396 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
ACLYP53396 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.5■□□□□ 0.55
ACLYP53396 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ACLYP53396 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ACLYP53396 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.5■□□□□ 0.55
ACLYP53396 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ACLYP53396 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
ACLYP53396 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.49■□□□□ 0.55
ACLYP53396 AC016396.2-201ENST00000562575 1417 ntBASIC18.49■□□□□ 0.55
ACLYP53396 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ACLYP53396 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ACLYP53396 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ACLYP53396 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.49■□□□□ 0.55
ACLYP53396 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.49■□□□□ 0.55
ACLYP53396 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
ACLYP53396 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.49■□□□□ 0.55
ACLYP53396 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
ACLYP53396 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ACLYP53396 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ACLYP53396 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ACLYP53396 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
ACLYP53396 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
ACLYP53396 FAM220BP-201ENST00000377689 816 ntBASIC18.49■□□□□ 0.55
ACLYP53396 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.49■□□□□ 0.55
ACLYP53396 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.49■□□□□ 0.55
ACLYP53396 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC18.49■□□□□ 0.55
ACLYP53396 GPR53P-205ENST00000457298 1084 ntBASIC18.49■□□□□ 0.55
ACLYP53396 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.49■□□□□ 0.55
ACLYP53396 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
ACLYP53396 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.49■□□□□ 0.55
ACLYP53396 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.49■□□□□ 0.55
ACLYP53396 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC18.49■□□□□ 0.55
ACLYP53396 SPTSSB-204ENST00000617024 1292 ntBASIC18.49■□□□□ 0.55
ACLYP53396 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ACLYP53396 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ACLYP53396 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.49■□□□□ 0.55
ACLYP53396 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ACLYP53396 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ACLYP53396 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ACLYP53396 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.49■□□□□ 0.55
ACLYP53396 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
ACLYP53396 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
ACLYP53396 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.48■□□□□ 0.55
ACLYP53396 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
ACLYP53396 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ACLYP53396 AC098614.1-201ENST00000368528 745 ntBASIC18.48■□□□□ 0.55
ACLYP53396 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC18.48■□□□□ 0.55
ACLYP53396 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ACLYP53396 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
ACLYP53396 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC18.48■□□□□ 0.55
ACLYP53396 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ACLYP53396 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ACLYP53396 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ACLYP53396 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ACLYP53396 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ACLYP53396 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ACLYP53396 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ACLYP53396 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ACLYP53396 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms