Protein–RNA interactions for Protein: P50553

ASCL1, Achaete-scute homolog 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASCL1P50553 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.1■□□□□ 0.01
ASCL1P50553 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ASCL1P50553 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ASCL1P50553 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.1■□□□□ 0.01
ASCL1P50553 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ASCL1P50553 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ASCL1P50553 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ASCL1P50553 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ASCL1P50553 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ASCL1P50553 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ASCL1P50553 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
ASCL1P50553 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.1■□□□□ 0.01
ASCL1P50553 FAM185BP-201ENST00000443595 716 ntBASIC15.1■□□□□ 0.01
ASCL1P50553 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ASCL1P50553 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.1■□□□□ 0.01
ASCL1P50553 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ASCL1P50553 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.1■□□□□ 0.01
ASCL1P50553 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ASCL1P50553 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.1■□□□□ 0.01
ASCL1P50553 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.1■□□□□ 0.01
ASCL1P50553 AL139327.4-201ENST00000612362 153 ntBASIC15.1■□□□□ 0.01
ASCL1P50553 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.1■□□□□ 0.01
ASCL1P50553 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.1■□□□□ 0.01
ASCL1P50553 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.1■□□□□ 0.01
ASCL1P50553 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ASCL1P50553 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ASCL1P50553 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ASCL1P50553 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
ASCL1P50553 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ASCL1P50553 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ASCL1P50553 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
ASCL1P50553 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
ASCL1P50553 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ASCL1P50553 AL645608.8-201ENST00000606034 2086 ntBASIC15.1■□□□□ 0.01
ASCL1P50553 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ASCL1P50553 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ASCL1P50553 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
ASCL1P50553 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ASCL1P50553 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.1■□□□□ 0.01
ASCL1P50553 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ASCL1P50553 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
ASCL1P50553 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
ASCL1P50553 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ASCL1P50553 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.09■□□□□ 0.01
ASCL1P50553 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
ASCL1P50553 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ASCL1P50553 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ASCL1P50553 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
ASCL1P50553 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ASCL1P50553 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ASCL1P50553 FER1L4-210ENST00000615531 5998 ntBASIC15.09■□□□□ 0.01
ASCL1P50553 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
ASCL1P50553 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ASCL1P50553 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ASCL1P50553 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
ASCL1P50553 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.09■□□□□ 0.01
ASCL1P50553 TSEN15P1-201ENST00000423257 515 ntBASIC15.09■□□□□ 0.01
ASCL1P50553 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.09■□□□□ 0.01
ASCL1P50553 PAWRP1-201ENST00000451083 565 ntBASIC15.09■□□□□ 0.01
ASCL1P50553 AL513480.1-201ENST00000451731 511 ntBASIC15.09■□□□□ 0.01
ASCL1P50553 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ASCL1P50553 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.09■□□□□ 0.01
ASCL1P50553 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.09■□□□□ 0.01
ASCL1P50553 AC004835.2-201ENST00000603762 682 ntBASIC15.09■□□□□ 0.01
ASCL1P50553 AC027612.4-201ENST00000605371 583 ntBASIC15.09■□□□□ 0.01
ASCL1P50553 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.09■□□□□ 0.01
ASCL1P50553 LINC01451-201ENST00000623792 534 ntBASIC15.09■□□□□ 0.01
ASCL1P50553 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.09■□□□□ 0.01
ASCL1P50553 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ASCL1P50553 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ASCL1P50553 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ASCL1P50553 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.09■□□□□ 0.01
ASCL1P50553 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ASCL1P50553 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
ASCL1P50553 AC129492.6-201ENST00000611383 1305 ntBASIC15.09■□□□□ 0.01
ASCL1P50553 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.09■□□□□ 0.01
ASCL1P50553 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ASCL1P50553 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.09■□□□□ 0.01
ASCL1P50553 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ASCL1P50553 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ASCL1P50553 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ASCL1P50553 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.09■□□□□ 0.01
ASCL1P50553 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ASCL1P50553 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
ASCL1P50553 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ASCL1P50553 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ASCL1P50553 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
ASCL1P50553 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.08■□□□□ 0.01
ASCL1P50553 AC138028.4-201ENST00000564984 1845 ntBASIC15.08■□□□□ 0.01
ASCL1P50553 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
ASCL1P50553 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
ASCL1P50553 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
ASCL1P50553 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
ASCL1P50553 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.08■□□□□ 0
ASCL1P50553 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
ASCL1P50553 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.08■□□□□ 0
ASCL1P50553 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.08■□□□□ 0
ASCL1P50553 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
ASCL1P50553 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ASCL1P50553 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms