Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC6A12P48065 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC6A12P48065 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.32■□□□□ 0.2
SLC6A12P48065 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.32■□□□□ 0.2
SLC6A12P48065 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.32■□□□□ 0.2
SLC6A12P48065 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.32■□□□□ 0.2
SLC6A12P48065 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.32■□□□□ 0.2
SLC6A12P48065 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.32■□□□□ 0.2
SLC6A12P48065 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SLC6A12P48065 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.32■□□□□ 0.2
SLC6A12P48065 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.32■□□□□ 0.2
SLC6A12P48065 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.32■□□□□ 0.2
SLC6A12P48065 AC131009.4-201ENST00000624048 1740 ntBASIC16.32■□□□□ 0.2
SLC6A12P48065 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SLC6A12P48065 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SLC6A12P48065 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC6A12P48065 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC6A12P48065 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
SLC6A12P48065 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.32■□□□□ 0.2
SLC6A12P48065 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC6A12P48065 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC6A12P48065 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SLC6A12P48065 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A12P48065 PCDHB19P-201ENST00000570871 2371 ntBASIC16.31■□□□□ 0.2
SLC6A12P48065 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A12P48065 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.31■□□□□ 0.2
SLC6A12P48065 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A12P48065 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A12P48065 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A12P48065 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A12P48065 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A12P48065 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A12P48065 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A12P48065 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.31■□□□□ 0.2
SLC6A12P48065 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A12P48065 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A12P48065 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A12P48065 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A12P48065 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A12P48065 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A12P48065 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.31■□□□□ 0.2
SLC6A12P48065 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SLC6A12P48065 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
SLC6A12P48065 MRPL20P1-201ENST00000400819 433 ntBASIC16.31■□□□□ 0.2
SLC6A12P48065 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A12P48065 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.31■□□□□ 0.2
SLC6A12P48065 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.31■□□□□ 0.2
SLC6A12P48065 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.31■□□□□ 0.2
SLC6A12P48065 SLC25A6P4-201ENST00000586535 553 ntBASIC16.31■□□□□ 0.2
SLC6A12P48065 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A12P48065 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.31■□□□□ 0.2
SLC6A12P48065 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.31■□□□□ 0.2
SLC6A12P48065 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SLC6A12P48065 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.31■□□□□ 0.2
SLC6A12P48065 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A12P48065 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A12P48065 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A12P48065 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A12P48065 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A12P48065 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A12P48065 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A12P48065 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A12P48065 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.31■□□□□ 0.2
SLC6A12P48065 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
SLC6A12P48065 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A12P48065 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A12P48065 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A12P48065 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC6A12P48065 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC6A12P48065 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC6A12P48065 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC6A12P48065 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.3■□□□□ 0.2
SLC6A12P48065 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.3■□□□□ 0.2
SLC6A12P48065 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.3■□□□□ 0.2
SLC6A12P48065 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC6A12P48065 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.3■□□□□ 0.2
SLC6A12P48065 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
SLC6A12P48065 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.3■□□□□ 0.2
SLC6A12P48065 AC092910.1-201ENST00000482027 1129 ntBASIC16.3■□□□□ 0.2
SLC6A12P48065 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC6A12P48065 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.3■□□□□ 0.2
SLC6A12P48065 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.3■□□□□ 0.2
SLC6A12P48065 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC6A12P48065 AC005412.3-201ENST00000580309 715 ntBASIC16.3■□□□□ 0.2
SLC6A12P48065 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
SLC6A12P48065 AC004790.2-201ENST00000623588 572 ntBASIC16.3■□□□□ 0.2
SLC6A12P48065 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC6A12P48065 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC6A12P48065 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.3■□□□□ 0.2
SLC6A12P48065 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC6A12P48065 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC6A12P48065 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SLC6A12P48065 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
SLC6A12P48065 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SLC6A12P48065 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC6A12P48065 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC6A12P48065 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC6A12P48065 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
SLC6A12P48065 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
SLC6A12P48065 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms