Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
MDH1P40925 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
MDH1P40925 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
MDH1P40925 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC17.05■□□□□ 0.32
MDH1P40925 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.05■□□□□ 0.32
MDH1P40925 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
MDH1P40925 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MDH1P40925 AC007663.1-201ENST00000438948 1240 ntBASIC17.05■□□□□ 0.32
MDH1P40925 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.05■□□□□ 0.32
MDH1P40925 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.05■□□□□ 0.32
MDH1P40925 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MDH1P40925 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.05■□□□□ 0.32
MDH1P40925 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.05■□□□□ 0.32
MDH1P40925 AC073648.6-201ENST00000641589 218 ntBASIC17.05■□□□□ 0.32
MDH1P40925 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
MDH1P40925 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MDH1P40925 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC17.05■□□□□ 0.32
MDH1P40925 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.05■□□□□ 0.32
MDH1P40925 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
MDH1P40925 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
MDH1P40925 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MDH1P40925 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
MDH1P40925 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
MDH1P40925 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC17.04■□□□□ 0.32
MDH1P40925 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MDH1P40925 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
MDH1P40925 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
MDH1P40925 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MDH1P40925 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MDH1P40925 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
MDH1P40925 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.04■□□□□ 0.32
MDH1P40925 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
MDH1P40925 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
MDH1P40925 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
MDH1P40925 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.04■□□□□ 0.32
MDH1P40925 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
MDH1P40925 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
MDH1P40925 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MDH1P40925 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MDH1P40925 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
MDH1P40925 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MDH1P40925 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MDH1P40925 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC17.04■□□□□ 0.32
MDH1P40925 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
MDH1P40925 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MDH1P40925 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.04■□□□□ 0.32
MDH1P40925 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.04■□□□□ 0.32
MDH1P40925 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MDH1P40925 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MDH1P40925 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.04■□□□□ 0.32
MDH1P40925 ESRRAP1-201ENST00000400596 1257 ntBASIC17.04■□□□□ 0.32
MDH1P40925 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.04■□□□□ 0.32
MDH1P40925 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
MDH1P40925 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MDH1P40925 C1QBPP2-201ENST00000528754 825 ntBASIC17.04■□□□□ 0.32
MDH1P40925 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.04■□□□□ 0.32
MDH1P40925 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.04■□□□□ 0.32
MDH1P40925 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.04■□□□□ 0.32
MDH1P40925 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MDH1P40925 REXO1L10P-201ENST00000615707 1290 ntBASIC17.04■□□□□ 0.32
MDH1P40925 REXO1L12P-201ENST00000622156 912 ntBASIC17.04■□□□□ 0.32
MDH1P40925 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
MDH1P40925 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
MDH1P40925 AC023157.3-201ENST00000619086 2088 ntBASIC17.04■□□□□ 0.32
MDH1P40925 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MDH1P40925 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MDH1P40925 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
MDH1P40925 GGT4P-201ENST00000623672 1708 ntBASIC17.04■□□□□ 0.32
MDH1P40925 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MDH1P40925 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
MDH1P40925 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
MDH1P40925 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC17.04■□□□□ 0.32
MDH1P40925 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MDH1P40925 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC17.04■□□□□ 0.32
MDH1P40925 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC17.04■□□□□ 0.32
MDH1P40925 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MDH1P40925 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
MDH1P40925 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
MDH1P40925 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MDH1P40925 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
MDH1P40925 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MDH1P40925 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
MDH1P40925 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC17.03■□□□□ 0.32
MDH1P40925 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MDH1P40925 AC097374.2-201ENST00000618617 1306 ntBASIC17.03■□□□□ 0.32
MDH1P40925 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
MDH1P40925 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17.03■□□□□ 0.32
MDH1P40925 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
MDH1P40925 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MDH1P40925 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.03■□□□□ 0.32
MDH1P40925 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.03■□□□□ 0.32
MDH1P40925 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MDH1P40925 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
MDH1P40925 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MDH1P40925 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.03■□□□□ 0.32
MDH1P40925 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MDH1P40925 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.03■□□□□ 0.32
MDH1P40925 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.03■□□□□ 0.32
MDH1P40925 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.03■□□□□ 0.32
MDH1P40925 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms