Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGCLP35914 AGGF1P2-201ENST00000426656 2106 ntBASIC16.84■□□□□ 0.29
HMGCLP35914 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGCLP35914 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HMGCLP35914 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGCLP35914 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGCLP35914 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGCLP35914 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.84■□□□□ 0.29
HMGCLP35914 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGCLP35914 AL022342.1-201ENST00000400363 863 ntBASIC16.84■□□□□ 0.29
HMGCLP35914 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HMGCLP35914 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.84■□□□□ 0.29
HMGCLP35914 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.84■□□□□ 0.29
HMGCLP35914 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
HMGCLP35914 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.84■□□□□ 0.29
HMGCLP35914 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.84■□□□□ 0.29
HMGCLP35914 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.84■□□□□ 0.29
HMGCLP35914 AC027601.4-201ENST00000611259 610 ntBASIC16.84■□□□□ 0.29
HMGCLP35914 FAM197Y3-203ENST00000618346 717 ntBASIC16.84■□□□□ 0.29
HMGCLP35914 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HMGCLP35914 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.84■□□□□ 0.29
HMGCLP35914 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
HMGCLP35914 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HMGCLP35914 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGCLP35914 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HMGCLP35914 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGCLP35914 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HMGCLP35914 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
HMGCLP35914 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGCLP35914 AC009053.2-201ENST00000563701 2365 ntBASIC16.84■□□□□ 0.29
HMGCLP35914 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.84■□□□□ 0.29
HMGCLP35914 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
HMGCLP35914 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
HMGCLP35914 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
HMGCLP35914 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
HMGCLP35914 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
HMGCLP35914 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
HMGCLP35914 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
HMGCLP35914 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMGCLP35914 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.83■□□□□ 0.28
HMGCLP35914 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMGCLP35914 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HMGCLP35914 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMGCLP35914 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMGCLP35914 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMGCLP35914 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
HMGCLP35914 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HMGCLP35914 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
HMGCLP35914 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
HMGCLP35914 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
HMGCLP35914 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
HMGCLP35914 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HMGCLP35914 AC007967.2-201ENST00000432613 625 ntBASIC16.83■□□□□ 0.28
HMGCLP35914 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.83■□□□□ 0.28
HMGCLP35914 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.83■□□□□ 0.28
HMGCLP35914 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.83■□□□□ 0.28
HMGCLP35914 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.83■□□□□ 0.28
HMGCLP35914 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.83■□□□□ 0.28
HMGCLP35914 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.83■□□□□ 0.28
HMGCLP35914 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HMGCLP35914 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMGCLP35914 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.83■□□□□ 0.28
HMGCLP35914 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.83■□□□□ 0.28
HMGCLP35914 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.83■□□□□ 0.28
HMGCLP35914 AC087641.1-201ENST00000557561 1021 ntBASIC16.83■□□□□ 0.28
HMGCLP35914 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMGCLP35914 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMGCLP35914 MIR4515-201ENST00000584082 81 ntBASIC16.83■□□□□ 0.28
HMGCLP35914 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
HMGCLP35914 AC011676.5-201ENST00000624864 2660 ntBASIC16.83■□□□□ 0.28
HMGCLP35914 AP001350.2-201ENST00000625104 1094 ntBASIC16.83■□□□□ 0.28
HMGCLP35914 AC010507.1-201ENST00000633895 436 ntBASIC16.83■□□□□ 0.28
HMGCLP35914 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMGCLP35914 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMGCLP35914 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.83■□□□□ 0.28
HMGCLP35914 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMGCLP35914 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.83■□□□□ 0.28
HMGCLP35914 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
HMGCLP35914 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.82■□□□□ 0.28
HMGCLP35914 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HMGCLP35914 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
HMGCLP35914 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMGCLP35914 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMGCLP35914 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMGCLP35914 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
HMGCLP35914 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMGCLP35914 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMGCLP35914 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.82■□□□□ 0.28
HMGCLP35914 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
HMGCLP35914 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.82■□□□□ 0.28
HMGCLP35914 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
HMGCLP35914 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HMGCLP35914 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMGCLP35914 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.82■□□□□ 0.28
HMGCLP35914 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HMGCLP35914 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
HMGCLP35914 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.82■□□□□ 0.28
HMGCLP35914 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
HMGCLP35914 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.82■□□□□ 0.28
HMGCLP35914 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms