Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
RPA3P35244 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPA3P35244 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPA3P35244 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPA3P35244 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.17■□□□□ 0.34
RPA3P35244 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
RPA3P35244 AC009533.2-201ENST00000543664 586 ntBASIC17.17■□□□□ 0.34
RPA3P35244 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
RPA3P35244 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.17■□□□□ 0.34
RPA3P35244 MIR3652-201ENST00000579335 131 ntBASIC17.17■□□□□ 0.34
RPA3P35244 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.17■□□□□ 0.34
RPA3P35244 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPA3P35244 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RPA3P35244 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.17■□□□□ 0.34
RPA3P35244 AC105917.1-201ENST00000506637 2539 ntBASIC17.17■□□□□ 0.34
RPA3P35244 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
RPA3P35244 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPA3P35244 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RPA3P35244 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RPA3P35244 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPA3P35244 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.17■□□□□ 0.34
RPA3P35244 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
RPA3P35244 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPA3P35244 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.17■□□□□ 0.34
RPA3P35244 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RPA3P35244 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
RPA3P35244 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RPA3P35244 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
RPA3P35244 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.16■□□□□ 0.34
RPA3P35244 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RPA3P35244 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RPA3P35244 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.16■□□□□ 0.34
RPA3P35244 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
RPA3P35244 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.16■□□□□ 0.34
RPA3P35244 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RPA3P35244 AC007967.3-201ENST00000434308 558 ntBASIC17.16■□□□□ 0.34
RPA3P35244 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.16■□□□□ 0.34
RPA3P35244 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.16■□□□□ 0.34
RPA3P35244 AC099336.1-202ENST00000602961 463 ntBASIC17.16■□□□□ 0.34
RPA3P35244 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.16■□□□□ 0.34
RPA3P35244 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.16■□□□□ 0.34
RPA3P35244 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.16■□□□□ 0.34
RPA3P35244 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RPA3P35244 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
RPA3P35244 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.16■□□□□ 0.34
RPA3P35244 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RPA3P35244 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RPA3P35244 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RPA3P35244 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RPA3P35244 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RPA3P35244 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
RPA3P35244 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RPA3P35244 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
RPA3P35244 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
RPA3P35244 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RPA3P35244 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RPA3P35244 AL391256.1-201ENST00000443260 1855 ntBASIC17.16■□□□□ 0.34
RPA3P35244 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RPA3P35244 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
RPA3P35244 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RPA3P35244 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RPA3P35244 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.15■□□□□ 0.34
RPA3P35244 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.15■□□□□ 0.34
RPA3P35244 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.15■□□□□ 0.34
RPA3P35244 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
RPA3P35244 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.15■□□□□ 0.34
RPA3P35244 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RPA3P35244 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
RPA3P35244 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.15■□□□□ 0.34
RPA3P35244 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RPA3P35244 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.15■□□□□ 0.34
RPA3P35244 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
RPA3P35244 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RPA3P35244 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RPA3P35244 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RPA3P35244 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RPA3P35244 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RPA3P35244 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.15■□□□□ 0.34
RPA3P35244 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
RPA3P35244 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RPA3P35244 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.15■□□□□ 0.34
RPA3P35244 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RPA3P35244 IGHV3-47-201ENST00000425060 335 ntBASIC17.15■□□□□ 0.34
RPA3P35244 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RPA3P35244 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.15■□□□□ 0.34
RPA3P35244 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RPA3P35244 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.15■□□□□ 0.34
RPA3P35244 AC096582.2-201ENST00000510860 516 ntBASIC17.15■□□□□ 0.34
RPA3P35244 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.15■□□□□ 0.34
RPA3P35244 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.15■□□□□ 0.34
RPA3P35244 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.15■□□□□ 0.34
RPA3P35244 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.15■□□□□ 0.34
RPA3P35244 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.15■□□□□ 0.34
RPA3P35244 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RPA3P35244 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RPA3P35244 AC024909.3-201ENST00000611513 2257 ntBASIC17.15■□□□□ 0.34
RPA3P35244 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RPA3P35244 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RPA3P35244 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
RPA3P35244 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms