Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
PTPN6P29350 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.1■□□□□ 0.17
PTPN6P29350 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTPN6P29350 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTPN6P29350 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTPN6P29350 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PTPN6P29350 AP002414.1-201ENST00000391405 1147 ntBASIC16.1■□□□□ 0.17
PTPN6P29350 AC079781.3-201ENST00000449110 356 ntBASIC16.1■□□□□ 0.17
PTPN6P29350 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PTPN6P29350 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.1■□□□□ 0.17
PTPN6P29350 AP002490.2-201ENST00000524791 560 ntBASIC16.1■□□□□ 0.17
PTPN6P29350 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.1■□□□□ 0.17
PTPN6P29350 AL031008.1-201ENST00000619963 541 ntBASIC16.1■□□□□ 0.17
PTPN6P29350 AC073592.4-201ENST00000623827 446 ntBASIC16.1■□□□□ 0.17
PTPN6P29350 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.1■□□□□ 0.17
PTPN6P29350 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTPN6P29350 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTPN6P29350 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTPN6P29350 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTPN6P29350 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTPN6P29350 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PTPN6P29350 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTPN6P29350 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTPN6P29350 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.1■□□□□ 0.17
PTPN6P29350 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PTPN6P29350 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
PTPN6P29350 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.1■□□□□ 0.17
PTPN6P29350 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTPN6P29350 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PTPN6P29350 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN6P29350 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN6P29350 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PTPN6P29350 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN6P29350 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN6P29350 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN6P29350 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN6P29350 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN6P29350 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN6P29350 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
PTPN6P29350 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.09■□□□□ 0.17
PTPN6P29350 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN6P29350 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.09■□□□□ 0.17
PTPN6P29350 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.09■□□□□ 0.17
PTPN6P29350 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN6P29350 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
PTPN6P29350 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN6P29350 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN6P29350 ABCD1P5-201ENST00000445663 754 ntBASIC16.09■□□□□ 0.17
PTPN6P29350 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.09■□□□□ 0.17
PTPN6P29350 AC106795.1-205ENST00000512851 1056 ntBASIC16.09■□□□□ 0.17
PTPN6P29350 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.09■□□□□ 0.17
PTPN6P29350 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
PTPN6P29350 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN6P29350 AC104692.2-201ENST00000603054 253 ntBASIC16.09■□□□□ 0.17
PTPN6P29350 AL121912.1-201ENST00000603683 238 ntBASIC16.09■□□□□ 0.17
PTPN6P29350 AP001269.4-201ENST00000609611 512 ntBASIC16.09■□□□□ 0.17
PTPN6P29350 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.09■□□□□ 0.17
PTPN6P29350 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN6P29350 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN6P29350 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN6P29350 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
PTPN6P29350 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN6P29350 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN6P29350 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.09■□□□□ 0.17
PTPN6P29350 SIGLEC16-201ENST00000599858 1437 ntBASIC16.09■□□□□ 0.17
PTPN6P29350 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
PTPN6P29350 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN6P29350 AC092364.2-201ENST00000596710 2692 ntBASIC16.09■□□□□ 0.17
PTPN6P29350 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.09■□□□□ 0.17
PTPN6P29350 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN6P29350 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN6P29350 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.09■□□□□ 0.17
PTPN6P29350 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PTPN6P29350 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PTPN6P29350 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PTPN6P29350 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.08■□□□□ 0.17
PTPN6P29350 LINC00895-201ENST00000629028 1637 ntBASIC16.08■□□□□ 0.17
PTPN6P29350 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.08■□□□□ 0.17
PTPN6P29350 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PTPN6P29350 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.08■□□□□ 0.17
PTPN6P29350 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
PTPN6P29350 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PTPN6P29350 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.08■□□□□ 0.16
PTPN6P29350 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTPN6P29350 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.08■□□□□ 0.16
PTPN6P29350 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PTPN6P29350 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.08■□□□□ 0.16
PTPN6P29350 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTPN6P29350 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTPN6P29350 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTPN6P29350 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTPN6P29350 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.08■□□□□ 0.16
PTPN6P29350 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.08■□□□□ 0.16
PTPN6P29350 RBM17P3-201ENST00000417687 1192 ntBASIC16.08■□□□□ 0.16
PTPN6P29350 AL020989.1-201ENST00000422979 469 ntBASIC16.08■□□□□ 0.16
PTPN6P29350 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.08■□□□□ 0.16
PTPN6P29350 SIGLEC30P-201ENST00000455569 941 ntBASIC16.08■□□□□ 0.16
PTPN6P29350 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.08■□□□□ 0.16
PTPN6P29350 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.08■□□□□ 0.16
PTPN6P29350 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms