Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HTR1EP28566 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HTR1EP28566 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HTR1EP28566 NSUN5P1-202ENST00000421140 1535 ntBASIC16.28■□□□□ 0.2
HTR1EP28566 NSUN5P2-203ENST00000457352 1529 ntBASIC16.28■□□□□ 0.2
HTR1EP28566 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HTR1EP28566 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
HTR1EP28566 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
HTR1EP28566 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.28■□□□□ 0.2
HTR1EP28566 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
HTR1EP28566 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HTR1EP28566 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.28■□□□□ 0.2
HTR1EP28566 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.27■□□□□ 0.2
HTR1EP28566 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HTR1EP28566 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HTR1EP28566 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HTR1EP28566 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HTR1EP28566 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
HTR1EP28566 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HTR1EP28566 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.27■□□□□ 0.2
HTR1EP28566 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HTR1EP28566 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.27■□□□□ 0.2
HTR1EP28566 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HTR1EP28566 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HTR1EP28566 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HTR1EP28566 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
HTR1EP28566 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HTR1EP28566 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HTR1EP28566 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HTR1EP28566 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HTR1EP28566 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.27■□□□□ 0.2
HTR1EP28566 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HTR1EP28566 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
HTR1EP28566 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.27■□□□□ 0.2
HTR1EP28566 FAM197Y8-203ENST00000450145 560 ntBASIC16.27■□□□□ 0.2
HTR1EP28566 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.27■□□□□ 0.2
HTR1EP28566 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.27■□□□□ 0.2
HTR1EP28566 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HTR1EP28566 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.27■□□□□ 0.2
HTR1EP28566 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.27■□□□□ 0.2
HTR1EP28566 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
HTR1EP28566 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.27■□□□□ 0.2
HTR1EP28566 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
HTR1EP28566 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HTR1EP28566 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
HTR1EP28566 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HTR1EP28566 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.19
HTR1EP28566 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
HTR1EP28566 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
HTR1EP28566 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
HTR1EP28566 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.27■□□□□ 0.19
HTR1EP28566 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HTR1EP28566 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.27■□□□□ 0.19
HTR1EP28566 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
HTR1EP28566 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HTR1EP28566 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
HTR1EP28566 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.26■□□□□ 0.19
HTR1EP28566 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HTR1EP28566 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HTR1EP28566 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HTR1EP28566 AL662844.4-201ENST00000606367 2838 ntBASIC16.26■□□□□ 0.19
HTR1EP28566 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
HTR1EP28566 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.26■□□□□ 0.19
HTR1EP28566 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HTR1EP28566 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HTR1EP28566 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HTR1EP28566 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HTR1EP28566 MINOS1P3-201ENST00000457048 203 ntBASIC16.26■□□□□ 0.19
HTR1EP28566 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.26■□□□□ 0.19
HTR1EP28566 AC093909.1-201ENST00000504731 1122 ntBASIC16.26■□□□□ 0.19
HTR1EP28566 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
HTR1EP28566 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.26■□□□□ 0.19
HTR1EP28566 SLC25A1P1-201ENST00000528351 927 ntBASIC16.26■□□□□ 0.19
HTR1EP28566 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
HTR1EP28566 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HTR1EP28566 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HTR1EP28566 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
HTR1EP28566 TP73-AS1-207ENST00000624167 988 ntBASIC16.26■□□□□ 0.19
HTR1EP28566 AC007950.2-201ENST00000615045 2347 ntBASIC16.26■□□□□ 0.19
HTR1EP28566 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HTR1EP28566 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HTR1EP28566 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
HTR1EP28566 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.26■□□□□ 0.19
HTR1EP28566 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HTR1EP28566 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
HTR1EP28566 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HTR1EP28566 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HTR1EP28566 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HTR1EP28566 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.26■□□□□ 0.19
HTR1EP28566 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
HTR1EP28566 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HTR1EP28566 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
HTR1EP28566 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.25■□□□□ 0.19
HTR1EP28566 FRMD8P1-201ENST00000440433 1524 ntBASIC16.25■□□□□ 0.19
HTR1EP28566 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HTR1EP28566 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.25■□□□□ 0.19
HTR1EP28566 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HTR1EP28566 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
HTR1EP28566 HLA-A-202ENST00000376806 1854 ntBASIC16.25■□□□□ 0.19
HTR1EP28566 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms