Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CD40P25942 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.58□□□□□ -0.08
CD40P25942 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.58□□□□□ -0.08
CD40P25942 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CD40P25942 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CD40P25942 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.58□□□□□ -0.08
CD40P25942 AP000344.2-201ENST00000512987 629 ntBASIC14.58□□□□□ -0.08
CD40P25942 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.58□□□□□ -0.08
CD40P25942 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.58□□□□□ -0.08
CD40P25942 AC087641.1-201ENST00000557561 1021 ntBASIC14.58□□□□□ -0.08
CD40P25942 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.58□□□□□ -0.08
CD40P25942 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.58□□□□□ -0.08
CD40P25942 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.58□□□□□ -0.08
CD40P25942 MPDU1-223ENST00000582151 728 ntBASIC14.58□□□□□ -0.08
CD40P25942 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.58□□□□□ -0.08
CD40P25942 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.58□□□□□ -0.08
CD40P25942 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.58□□□□□ -0.08
CD40P25942 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD40P25942 AP001350.2-201ENST00000625104 1094 ntBASIC14.58□□□□□ -0.08
CD40P25942 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD40P25942 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CD40P25942 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
CD40P25942 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CD40P25942 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CD40P25942 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CD40P25942 SLC22A20-204ENST00000530038 1673 ntBASIC14.58□□□□□ -0.08
CD40P25942 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD40P25942 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.58□□□□□ -0.08
CD40P25942 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC14.58□□□□□ -0.08
CD40P25942 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD40P25942 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD40P25942 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD40P25942 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD40P25942 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD40P25942 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CD40P25942 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC14.57□□□□□ -0.08
CD40P25942 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.57□□□□□ -0.08
CD40P25942 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD40P25942 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD40P25942 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD40P25942 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD40P25942 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CD40P25942 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD40P25942 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD40P25942 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CD40P25942 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CD40P25942 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
CD40P25942 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CD40P25942 AL121761.2-201ENST00000598007 1648 ntBASIC14.57□□□□□ -0.08
CD40P25942 AL023806.1-201ENST00000603994 1649 ntBASIC14.57□□□□□ -0.08
CD40P25942 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD40P25942 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CD40P25942 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CD40P25942 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.57□□□□□ -0.08
CD40P25942 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.57□□□□□ -0.08
CD40P25942 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.57□□□□□ -0.08
CD40P25942 FAM86C2P-203ENST00000528684 1004 ntBASIC14.57□□□□□ -0.08
CD40P25942 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.57□□□□□ -0.08
CD40P25942 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CD40P25942 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.57□□□□□ -0.08
CD40P25942 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.57□□□□□ -0.08
CD40P25942 AL513210.1-201ENST00000629608 234 ntBASIC14.57□□□□□ -0.08
CD40P25942 AC105339.1-204ENST00000636249 355 ntBASIC14.57□□□□□ -0.08
CD40P25942 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC14.57□□□□□ -0.08
CD40P25942 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD40P25942 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.57□□□□□ -0.08
CD40P25942 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC14.57□□□□□ -0.08
CD40P25942 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC14.57□□□□□ -0.08
CD40P25942 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD40P25942 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CD40P25942 AC131009.4-201ENST00000624048 1740 ntBASIC14.57□□□□□ -0.08
CD40P25942 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CD40P25942 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CD40P25942 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
CD40P25942 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD40P25942 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD40P25942 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD40P25942 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CD40P25942 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CD40P25942 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CD40P25942 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
CD40P25942 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CD40P25942 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CD40P25942 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC14.56□□□□□ -0.08
CD40P25942 AC141586.5-201ENST00000624546 2050 ntBASIC14.56□□□□□ -0.08
CD40P25942 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC14.56□□□□□ -0.08
CD40P25942 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CD40P25942 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
CD40P25942 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
CD40P25942 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CD40P25942 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CD40P25942 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CD40P25942 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CD40P25942 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.56□□□□□ -0.08
CD40P25942 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CD40P25942 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.56□□□□□ -0.08
CD40P25942 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.56□□□□□ -0.08
CD40P25942 PMS2P2-201ENST00000425039 1128 ntBASIC14.56□□□□□ -0.08
CD40P25942 AL671277.1-201ENST00000429656 993 ntBASIC14.56□□□□□ -0.08
CD40P25942 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms