Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.1■□□□□ 0.33
XPAP23025 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
XPAP23025 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
XPAP23025 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
XPAP23025 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
XPAP23025 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
XPAP23025 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.09■□□□□ 0.33
XPAP23025 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
XPAP23025 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.09■□□□□ 0.33
XPAP23025 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.09■□□□□ 0.33
XPAP23025 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
XPAP23025 AC106820.2-201ENST00000563775 3264 ntBASIC17.09■□□□□ 0.33
XPAP23025 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
XPAP23025 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.09■□□□□ 0.33
XPAP23025 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.09■□□□□ 0.33
XPAP23025 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.09■□□□□ 0.33
XPAP23025 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.09■□□□□ 0.33
XPAP23025 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.09■□□□□ 0.33
XPAP23025 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
XPAP23025 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.09■□□□□ 0.33
XPAP23025 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.09■□□□□ 0.33
XPAP23025 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.09■□□□□ 0.33
XPAP23025 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.09■□□□□ 0.33
XPAP23025 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
XPAP23025 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
XPAP23025 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
XPAP23025 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
XPAP23025 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
XPAP23025 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
XPAP23025 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
XPAP23025 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
XPAP23025 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
XPAP23025 AC141586.5-201ENST00000624546 2050 ntBASIC17.09■□□□□ 0.33
XPAP23025 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
XPAP23025 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
XPAP23025 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
XPAP23025 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
XPAP23025 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
XPAP23025 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
XPAP23025 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
XPAP23025 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
XPAP23025 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
XPAP23025 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
XPAP23025 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
XPAP23025 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
XPAP23025 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
XPAP23025 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
XPAP23025 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
XPAP23025 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
XPAP23025 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.08■□□□□ 0.32
XPAP23025 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
XPAP23025 AL021920.2-201ENST00000624828 1351 ntBASIC17.08■□□□□ 0.32
XPAP23025 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
XPAP23025 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
XPAP23025 SLC25A1P3-201ENST00000395415 828 ntBASIC17.08■□□□□ 0.32
XPAP23025 FAM185BP-201ENST00000443595 716 ntBASIC17.08■□□□□ 0.32
XPAP23025 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.08■□□□□ 0.32
XPAP23025 MTDHP5-201ENST00000598980 586 ntBASIC17.08■□□□□ 0.32
XPAP23025 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.32
XPAP23025 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.08■□□□□ 0.32
XPAP23025 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
XPAP23025 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
XPAP23025 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
XPAP23025 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
XPAP23025 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.08■□□□□ 0.32
XPAP23025 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
XPAP23025 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
XPAP23025 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
XPAP23025 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
XPAP23025 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
XPAP23025 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
XPAP23025 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
XPAP23025 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
XPAP23025 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.07■□□□□ 0.32
XPAP23025 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
XPAP23025 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
XPAP23025 LINC02012-201ENST00000608206 1725 ntBASIC17.07■□□□□ 0.32
XPAP23025 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
XPAP23025 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.07■□□□□ 0.32
XPAP23025 PCDHB18P-201ENST00000524813 2368 ntBASIC17.07■□□□□ 0.32
XPAP23025 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.07■□□□□ 0.32
XPAP23025 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
XPAP23025 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
XPAP23025 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
XPAP23025 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
XPAP23025 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
XPAP23025 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
XPAP23025 MIR1233-2-201ENST00000408138 82 ntBASIC17.07■□□□□ 0.32
XPAP23025 MIR1233-1-201ENST00000408722 82 ntBASIC17.07■□□□□ 0.32
XPAP23025 AC004832.2-201ENST00000426397 482 ntBASIC17.07■□□□□ 0.32
XPAP23025 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.07■□□□□ 0.32
XPAP23025 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
XPAP23025 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.07■□□□□ 0.32
XPAP23025 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.07■□□□□ 0.32
XPAP23025 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
XPAP23025 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
XPAP23025 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
XPAP23025 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
XPAP23025 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
XPAP23025 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms