Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
NFKB1P19838 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.25■□□□□ 0.35
NFKB1P19838 AF228730.7-201ENST00000641842 219 ntBASIC17.25■□□□□ 0.35
NFKB1P19838 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NFKB1P19838 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NFKB1P19838 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.25■□□□□ 0.35
NFKB1P19838 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NFKB1P19838 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NFKB1P19838 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.25■□□□□ 0.35
NFKB1P19838 AC002310.6-201ENST00000624451 1377 ntBASIC17.25■□□□□ 0.35
NFKB1P19838 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
NFKB1P19838 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.25■□□□□ 0.35
NFKB1P19838 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NFKB1P19838 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NFKB1P19838 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
NFKB1P19838 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NFKB1P19838 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
NFKB1P19838 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.24■□□□□ 0.35
NFKB1P19838 UBALD1-205ENST00000590891 2641 ntBASIC17.24■□□□□ 0.35
NFKB1P19838 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
NFKB1P19838 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NFKB1P19838 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.24■□□□□ 0.35
NFKB1P19838 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
NFKB1P19838 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NFKB1P19838 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.24■□□□□ 0.35
NFKB1P19838 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NFKB1P19838 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.24■□□□□ 0.35
NFKB1P19838 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.24■□□□□ 0.35
NFKB1P19838 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.24■□□□□ 0.35
NFKB1P19838 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.24■□□□□ 0.35
NFKB1P19838 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.24■□□□□ 0.35
NFKB1P19838 SLC25A6P2-201ENST00000497974 877 ntBASIC17.24■□□□□ 0.35
NFKB1P19838 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.24■□□□□ 0.35
NFKB1P19838 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.24■□□□□ 0.35
NFKB1P19838 AC105339.3-201ENST00000560043 636 ntBASIC17.24■□□□□ 0.35
NFKB1P19838 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.24■□□□□ 0.35
NFKB1P19838 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.24■□□□□ 0.35
NFKB1P19838 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NFKB1P19838 AC104692.2-201ENST00000603054 253 ntBASIC17.24■□□□□ 0.35
NFKB1P19838 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
NFKB1P19838 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NFKB1P19838 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.24■□□□□ 0.35
NFKB1P19838 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.24■□□□□ 0.35
NFKB1P19838 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NFKB1P19838 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NFKB1P19838 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NFKB1P19838 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NFKB1P19838 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.23■□□□□ 0.35
NFKB1P19838 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NFKB1P19838 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.23■□□□□ 0.35
NFKB1P19838 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NFKB1P19838 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.23■□□□□ 0.35
NFKB1P19838 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
NFKB1P19838 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.23■□□□□ 0.35
NFKB1P19838 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NFKB1P19838 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
NFKB1P19838 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.23■□□□□ 0.35
NFKB1P19838 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NFKB1P19838 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.23■□□□□ 0.35
NFKB1P19838 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.23■□□□□ 0.35
NFKB1P19838 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
NFKB1P19838 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.23■□□□□ 0.35
NFKB1P19838 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.23■□□□□ 0.35
NFKB1P19838 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.23■□□□□ 0.35
NFKB1P19838 AP002469.2-201ENST00000531724 424 ntBASIC17.23■□□□□ 0.35
NFKB1P19838 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NFKB1P19838 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.23■□□□□ 0.35
NFKB1P19838 AL356488.2-201ENST00000602755 427 ntBASIC17.23■□□□□ 0.35
NFKB1P19838 FAM215A-202ENST00000632077 792 ntBASIC17.23■□□□□ 0.35
NFKB1P19838 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.23■□□□□ 0.35
NFKB1P19838 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NFKB1P19838 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
NFKB1P19838 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
NFKB1P19838 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NFKB1P19838 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.23■□□□□ 0.35
NFKB1P19838 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NFKB1P19838 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NFKB1P19838 AC124067.4-201ENST00000519691 2379 ntBASIC17.23■□□□□ 0.35
NFKB1P19838 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NFKB1P19838 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NFKB1P19838 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NFKB1P19838 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.22■□□□□ 0.35
NFKB1P19838 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NFKB1P19838 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
NFKB1P19838 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NFKB1P19838 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NFKB1P19838 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.22■□□□□ 0.35
NFKB1P19838 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NFKB1P19838 LINC00895-201ENST00000629028 1637 ntBASIC17.22■□□□□ 0.35
NFKB1P19838 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NFKB1P19838 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
NFKB1P19838 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.22■□□□□ 0.35
NFKB1P19838 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.22■□□□□ 0.35
NFKB1P19838 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
NFKB1P19838 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NFKB1P19838 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.22■□□□□ 0.35
NFKB1P19838 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.22■□□□□ 0.35
NFKB1P19838 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
NFKB1P19838 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
NFKB1P19838 MIR1199-201ENST00000621445 119 ntBASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms