Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
VCLP18206 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
VCLP18206 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VCLP18206 NCF1C-201ENST00000438382 1427 ntBASIC17.11■□□□□ 0.33
VCLP18206 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VCLP18206 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VCLP18206 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
VCLP18206 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
VCLP18206 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
VCLP18206 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
VCLP18206 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VCLP18206 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VCLP18206 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
VCLP18206 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VCLP18206 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
VCLP18206 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
VCLP18206 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VCLP18206 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.1■□□□□ 0.33
VCLP18206 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
VCLP18206 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.1■□□□□ 0.33
VCLP18206 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VCLP18206 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
VCLP18206 RPS2P1-201ENST00000434010 821 ntBASIC17.1■□□□□ 0.33
VCLP18206 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
VCLP18206 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VCLP18206 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.1■□□□□ 0.33
VCLP18206 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VCLP18206 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.1■□□□□ 0.33
VCLP18206 AC107918.4-202ENST00000641623 219 ntBASIC17.1■□□□□ 0.33
VCLP18206 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
VCLP18206 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VCLP18206 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VCLP18206 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VCLP18206 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.1■□□□□ 0.33
VCLP18206 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VCLP18206 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VCLP18206 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
VCLP18206 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
VCLP18206 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VCLP18206 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VCLP18206 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
VCLP18206 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
VCLP18206 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.09■□□□□ 0.33
VCLP18206 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.09■□□□□ 0.33
VCLP18206 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.09■□□□□ 0.33
VCLP18206 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.09■□□□□ 0.33
VCLP18206 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.09■□□□□ 0.33
VCLP18206 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.09■□□□□ 0.33
VCLP18206 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.09■□□□□ 0.33
VCLP18206 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.09■□□□□ 0.33
VCLP18206 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.09■□□□□ 0.33
VCLP18206 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.09■□□□□ 0.33
VCLP18206 HLA-A-201ENST00000376802 1334 ntBASIC17.09■□□□□ 0.33
VCLP18206 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.09■□□□□ 0.33
VCLP18206 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.09■□□□□ 0.33
VCLP18206 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
VCLP18206 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.09■□□□□ 0.33
VCLP18206 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
VCLP18206 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
VCLP18206 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VCLP18206 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
VCLP18206 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
VCLP18206 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
VCLP18206 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VCLP18206 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
VCLP18206 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VCLP18206 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
VCLP18206 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
VCLP18206 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
VCLP18206 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
VCLP18206 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
VCLP18206 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.08■□□□□ 0.33
VCLP18206 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
VCLP18206 AC004817.3-201ENST00000602957 2129 ntBASIC17.08■□□□□ 0.33
VCLP18206 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.08■□□□□ 0.33
VCLP18206 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.08■□□□□ 0.33
VCLP18206 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.33
VCLP18206 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.08■□□□□ 0.33
VCLP18206 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VCLP18206 AC148477.5-201ENST00000625164 1645 ntBASIC17.08■□□□□ 0.32
VCLP18206 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
VCLP18206 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VCLP18206 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.08■□□□□ 0.32
VCLP18206 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VCLP18206 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VCLP18206 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
VCLP18206 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.08■□□□□ 0.32
VCLP18206 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VCLP18206 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VCLP18206 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.08■□□□□ 0.32
VCLP18206 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.08■□□□□ 0.32
VCLP18206 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.08■□□□□ 0.32
VCLP18206 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
VCLP18206 MIR1199-201ENST00000621445 119 ntBASIC17.08■□□□□ 0.32
VCLP18206 AC008735.5-201ENST00000623544 497 ntBASIC17.08■□□□□ 0.32
VCLP18206 AC148477.8-201ENST00000624298 468 ntBASIC17.08■□□□□ 0.32
VCLP18206 FAM215A-202ENST00000632077 792 ntBASIC17.08■□□□□ 0.32
VCLP18206 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VCLP18206 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
VCLP18206 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms