Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
NCK1P16333 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NCK1P16333 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NCK1P16333 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
NCK1P16333 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
NCK1P16333 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.07■□□□□ 0.16
NCK1P16333 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
NCK1P16333 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
NCK1P16333 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
NCK1P16333 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
NCK1P16333 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
NCK1P16333 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NCK1P16333 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
NCK1P16333 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.06■□□□□ 0.16
NCK1P16333 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.06■□□□□ 0.16
NCK1P16333 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
NCK1P16333 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NCK1P16333 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.06■□□□□ 0.16
NCK1P16333 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
NCK1P16333 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NCK1P16333 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.06■□□□□ 0.16
NCK1P16333 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NCK1P16333 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
NCK1P16333 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
NCK1P16333 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.06■□□□□ 0.16
NCK1P16333 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NCK1P16333 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.06■□□□□ 0.16
NCK1P16333 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NCK1P16333 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
NCK1P16333 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.06■□□□□ 0.16
NCK1P16333 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
NCK1P16333 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NCK1P16333 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.06■□□□□ 0.16
NCK1P16333 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NCK1P16333 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
NCK1P16333 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NCK1P16333 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NCK1P16333 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
NCK1P16333 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
NCK1P16333 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NCK1P16333 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
NCK1P16333 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NCK1P16333 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
NCK1P16333 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.05■□□□□ 0.16
NCK1P16333 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
NCK1P16333 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.05■□□□□ 0.16
NCK1P16333 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
NCK1P16333 AL353593.2-201ENST00000602529 1483 ntBASIC16.05■□□□□ 0.16
NCK1P16333 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NCK1P16333 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
NCK1P16333 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NCK1P16333 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NCK1P16333 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
NCK1P16333 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NCK1P16333 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NCK1P16333 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NCK1P16333 AC112907.2-201ENST00000448639 330 ntBASIC16.05■□□□□ 0.16
NCK1P16333 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.05■□□□□ 0.16
NCK1P16333 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.05■□□□□ 0.16
NCK1P16333 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.05■□□□□ 0.16
NCK1P16333 AP002490.2-201ENST00000524791 560 ntBASIC16.05■□□□□ 0.16
NCK1P16333 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.05■□□□□ 0.16
NCK1P16333 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
NCK1P16333 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.05■□□□□ 0.16
NCK1P16333 AC005336.2-201ENST00000593183 939 ntBASIC16.05■□□□□ 0.16
NCK1P16333 AL138831.2-201ENST00000606564 490 ntBASIC16.05■□□□□ 0.16
NCK1P16333 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
NCK1P16333 AC073912.3-201ENST00000624414 853 ntBASIC16.05■□□□□ 0.16
NCK1P16333 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.05■□□□□ 0.16
NCK1P16333 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
NCK1P16333 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
NCK1P16333 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.05■□□□□ 0.16
NCK1P16333 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
NCK1P16333 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NCK1P16333 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NCK1P16333 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NCK1P16333 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.05■□□□□ 0.16
NCK1P16333 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NCK1P16333 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
NCK1P16333 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NCK1P16333 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NCK1P16333 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
NCK1P16333 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NCK1P16333 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NCK1P16333 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.04■□□□□ 0.16
NCK1P16333 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
NCK1P16333 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
NCK1P16333 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NCK1P16333 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
NCK1P16333 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.04■□□□□ 0.16
NCK1P16333 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
NCK1P16333 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
NCK1P16333 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NCK1P16333 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.04■□□□□ 0.16
NCK1P16333 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.04■□□□□ 0.16
NCK1P16333 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NCK1P16333 TUBB8P12-201ENST00000308911 1335 ntBASIC16.04■□□□□ 0.16
NCK1P16333 TUBB7P-202ENST00000428444 1305 ntBASIC16.04■□□□□ 0.16
NCK1P16333 TUBB8P7-204ENST00000567960 1332 ntBASIC16.04■□□□□ 0.16
NCK1P16333 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms