Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
DEFA4P12838 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
DEFA4P12838 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
DEFA4P12838 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC13.85□□□□□ -0.19
DEFA4P12838 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
DEFA4P12838 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
DEFA4P12838 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC13.85□□□□□ -0.19
DEFA4P12838 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
DEFA4P12838 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
DEFA4P12838 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
DEFA4P12838 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
DEFA4P12838 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC13.85□□□□□ -0.19
DEFA4P12838 AC010460.3-201ENST00000511359 1579 ntBASIC13.85□□□□□ -0.19
DEFA4P12838 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
DEFA4P12838 AC016396.2-201ENST00000562575 1417 ntBASIC13.85□□□□□ -0.19
DEFA4P12838 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
DEFA4P12838 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
DEFA4P12838 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
DEFA4P12838 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
DEFA4P12838 AL031133.1-201ENST00000406807 723 ntBASIC13.85□□□□□ -0.19
DEFA4P12838 AC005104.2-201ENST00000427818 678 ntBASIC13.85□□□□□ -0.19
DEFA4P12838 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC13.85□□□□□ -0.19
DEFA4P12838 PON3-205ENST00000451904 1053 ntTSL 3 BASIC13.85□□□□□ -0.19
DEFA4P12838 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC13.85□□□□□ -0.19
DEFA4P12838 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC13.85□□□□□ -0.19
DEFA4P12838 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC13.85□□□□□ -0.19
DEFA4P12838 DBP-204ENST00000599385 709 ntTSL 3 BASIC13.85□□□□□ -0.19
DEFA4P12838 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
DEFA4P12838 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
DEFA4P12838 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
DEFA4P12838 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
DEFA4P12838 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
DEFA4P12838 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
DEFA4P12838 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
DEFA4P12838 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
DEFA4P12838 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
DEFA4P12838 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
DEFA4P12838 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC13.85□□□□□ -0.19
DEFA4P12838 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
DEFA4P12838 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
DEFA4P12838 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
DEFA4P12838 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
DEFA4P12838 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
DEFA4P12838 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC13.85□□□□□ -0.19
DEFA4P12838 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
DEFA4P12838 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
DEFA4P12838 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
DEFA4P12838 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC13.84□□□□□ -0.19
DEFA4P12838 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.84□□□□□ -0.19
DEFA4P12838 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
DEFA4P12838 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
DEFA4P12838 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
DEFA4P12838 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
DEFA4P12838 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
DEFA4P12838 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
DEFA4P12838 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
DEFA4P12838 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
DEFA4P12838 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC13.84□□□□□ -0.19
DEFA4P12838 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
DEFA4P12838 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
DEFA4P12838 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
DEFA4P12838 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
DEFA4P12838 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
DEFA4P12838 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
DEFA4P12838 CHCHD2P8-201ENST00000429873 447 ntBASIC13.84□□□□□ -0.19
DEFA4P12838 AC007967.3-201ENST00000434308 558 ntBASIC13.84□□□□□ -0.19
DEFA4P12838 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC13.84□□□□□ -0.19
DEFA4P12838 RN7SL606P-201ENST00000472779 293 ntBASIC13.84□□□□□ -0.19
DEFA4P12838 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC13.84□□□□□ -0.19
DEFA4P12838 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
DEFA4P12838 RMI2-205ENST00000576027 818 ntTSL 2 BASIC13.84□□□□□ -0.19
DEFA4P12838 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC13.84□□□□□ -0.19
DEFA4P12838 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
DEFA4P12838 AL139327.4-201ENST00000612362 153 ntBASIC13.84□□□□□ -0.19
DEFA4P12838 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC13.84□□□□□ -0.19
DEFA4P12838 PCDHB17P-201ENST00000539533 2393 ntBASIC13.84□□□□□ -0.19
DEFA4P12838 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.84□□□□□ -0.19
DEFA4P12838 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
DEFA4P12838 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
DEFA4P12838 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
DEFA4P12838 PAUPAR-201ENST00000630360 2965 ntBASIC13.84□□□□□ -0.19
DEFA4P12838 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
DEFA4P12838 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
DEFA4P12838 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
DEFA4P12838 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
DEFA4P12838 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
DEFA4P12838 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
DEFA4P12838 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
DEFA4P12838 AC005332.1-201ENST00000577698 1310 ntBASIC13.84□□□□□ -0.19
DEFA4P12838 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
DEFA4P12838 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC13.84□□□□□ -0.19
DEFA4P12838 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC13.84□□□□□ -0.19
DEFA4P12838 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
DEFA4P12838 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC13.84□□□□□ -0.19
DEFA4P12838 RHBDF1P1-201ENST00000427504 1941 ntBASIC13.84□□□□□ -0.19
DEFA4P12838 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
DEFA4P12838 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC13.83□□□□□ -0.19
DEFA4P12838 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
DEFA4P12838 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
DEFA4P12838 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms