Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPRFP10586 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPRFP10586 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPRFP10586 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPRFP10586 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.18■□□□□ 0.66
PTPRFP10586 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PTPRFP10586 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPRFP10586 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.18■□□□□ 0.66
PTPRFP10586 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPRFP10586 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPRFP10586 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PTPRFP10586 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
PTPRFP10586 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
PTPRFP10586 ATP5G2P4-201ENST00000442175 420 ntBASIC19.17■□□□□ 0.66
PTPRFP10586 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC19.17■□□□□ 0.66
PTPRFP10586 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC19.17■□□□□ 0.66
PTPRFP10586 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPRFP10586 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.17■□□□□ 0.66
PTPRFP10586 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPRFP10586 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PTPRFP10586 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC19.17■□□□□ 0.66
PTPRFP10586 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC19.17■□□□□ 0.66
PTPRFP10586 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPRFP10586 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPRFP10586 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPRFP10586 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPRFP10586 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPRFP10586 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PTPRFP10586 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPRFP10586 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC19.17■□□□□ 0.66
PTPRFP10586 BTBD7P1-201ENST00000447253 1453 ntBASIC19.17■□□□□ 0.66
PTPRFP10586 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPRFP10586 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
PTPRFP10586 MIR1909-201ENST00000411312 80 ntBASIC19.17■□□□□ 0.66
PTPRFP10586 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC19.17■□□□□ 0.66
PTPRFP10586 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PTPRFP10586 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.17■□□□□ 0.66
PTPRFP10586 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
PTPRFP10586 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPRFP10586 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPRFP10586 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPRFP10586 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC19.16■□□□□ 0.66
PTPRFP10586 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.16■□□□□ 0.66
PTPRFP10586 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPRFP10586 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPRFP10586 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC19.16■□□□□ 0.66
PTPRFP10586 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC19.16■□□□□ 0.66
PTPRFP10586 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC19.16■□□□□ 0.66
PTPRFP10586 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPRFP10586 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PTPRFP10586 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PTPRFP10586 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPRFP10586 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPRFP10586 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC19.16■□□□□ 0.66
PTPRFP10586 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC19.16■□□□□ 0.66
PTPRFP10586 RASL12-203ENST00000434605 982 ntTSL 2 BASIC19.16■□□□□ 0.66
PTPRFP10586 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PTPRFP10586 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC19.16■□□□□ 0.66
PTPRFP10586 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PTPRFP10586 FHL2-212ENST00000607522 759 ntTSL 2 BASIC19.16■□□□□ 0.66
PTPRFP10586 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC19.16■□□□□ 0.66
PTPRFP10586 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.16■□□□□ 0.66
PTPRFP10586 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPRFP10586 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPRFP10586 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPRFP10586 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PTPRFP10586 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPRFP10586 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPRFP10586 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PTPRFP10586 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPRFP10586 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPRFP10586 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPRFP10586 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC19.16■□□□□ 0.66
PTPRFP10586 KRT8P12-202ENST00000472924 1397 ntBASIC19.16■□□□□ 0.66
PTPRFP10586 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
PTPRFP10586 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPRFP10586 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PTPRFP10586 AC093724.1-201ENST00000448659 1027 ntBASIC19.15■□□□□ 0.66
PTPRFP10586 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC19.15■□□□□ 0.66
PTPRFP10586 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.15■□□□□ 0.66
PTPRFP10586 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTPRFP10586 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.15■□□□□ 0.66
PTPRFP10586 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
PTPRFP10586 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PTPRFP10586 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PTPRFP10586 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
PTPRFP10586 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTPRFP10586 AL390961.4-201ENST00000623958 2535 ntBASIC19.15■□□□□ 0.66
PTPRFP10586 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.15■□□□□ 0.66
PTPRFP10586 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PTPRFP10586 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.15■□□□□ 0.66
PTPRFP10586 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.15■□□□□ 0.66
PTPRFP10586 RPS19-201ENST00000221975 500 ntTSL 3 BASIC19.15■□□□□ 0.66
PTPRFP10586 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTPRFP10586 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC19.15■□□□□ 0.66
PTPRFP10586 AC105021.1-202ENST00000570572 669 ntBASIC19.15■□□□□ 0.66
PTPRFP10586 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
PTPRFP10586 AL008721.1-201ENST00000609964 604 ntBASIC19.15■□□□□ 0.66
PTPRFP10586 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTPRFP10586 CROCCP2-202ENST00000412962 2773 ntBASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms