Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
RARAP10276 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.81■□□□□ 0.44
RARAP10276 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RARAP10276 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.81■□□□□ 0.44
RARAP10276 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RARAP10276 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RARAP10276 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RARAP10276 AL513477.1-201ENST00000602865 2407 ntBASIC17.81■□□□□ 0.44
RARAP10276 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
RARAP10276 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RARAP10276 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RARAP10276 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
RARAP10276 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RARAP10276 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
RARAP10276 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RARAP10276 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.8■□□□□ 0.44
RARAP10276 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RARAP10276 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.8■□□□□ 0.44
RARAP10276 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RARAP10276 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.8■□□□□ 0.44
RARAP10276 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
RARAP10276 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RARAP10276 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.8■□□□□ 0.44
RARAP10276 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.8■□□□□ 0.44
RARAP10276 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RARAP10276 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
RARAP10276 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.8■□□□□ 0.44
RARAP10276 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RARAP10276 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RARAP10276 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RARAP10276 AC008741.2-201ENST00000612792 3115 ntBASIC17.8■□□□□ 0.44
RARAP10276 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RARAP10276 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RARAP10276 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RARAP10276 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.8■□□□□ 0.44
RARAP10276 SAPCD2P3-201ENST00000455031 850 ntBASIC17.8■□□□□ 0.44
RARAP10276 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
RARAP10276 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
RARAP10276 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.8■□□□□ 0.44
RARAP10276 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.8■□□□□ 0.44
RARAP10276 IFNL4P1-201ENST00000607083 540 ntBASIC17.8■□□□□ 0.44
RARAP10276 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RARAP10276 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
RARAP10276 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.8■□□□□ 0.44
RARAP10276 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RARAP10276 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RARAP10276 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RARAP10276 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RARAP10276 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.8■□□□□ 0.44
RARAP10276 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RARAP10276 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RARAP10276 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.8■□□□□ 0.44
RARAP10276 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RARAP10276 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RARAP10276 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
RARAP10276 HLA-A-202ENST00000376806 1854 ntBASIC17.8■□□□□ 0.44
RARAP10276 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.8■□□□□ 0.44
RARAP10276 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RARAP10276 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RARAP10276 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RARAP10276 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RARAP10276 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RARAP10276 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RARAP10276 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RARAP10276 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RARAP10276 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.79■□□□□ 0.44
RARAP10276 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RARAP10276 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RARAP10276 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RARAP10276 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RARAP10276 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RARAP10276 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RARAP10276 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RARAP10276 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RARAP10276 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RARAP10276 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
RARAP10276 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.79■□□□□ 0.44
RARAP10276 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RARAP10276 AP002414.1-201ENST00000391405 1147 ntBASIC17.79■□□□□ 0.44
RARAP10276 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.79■□□□□ 0.44
RARAP10276 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
RARAP10276 UNC93B7-201ENST00000509439 705 ntBASIC17.79■□□□□ 0.44
RARAP10276 DUX4L17-201ENST00000557360 1267 ntBASIC17.79■□□□□ 0.44
RARAP10276 LINC01711-201ENST00000598340 967 ntBASIC17.79■□□□□ 0.44
RARAP10276 MTDHP4-201ENST00000600287 670 ntBASIC17.79■□□□□ 0.44
RARAP10276 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.79■□□□□ 0.44
RARAP10276 AL589182.2-201ENST00000619332 1049 ntBASIC17.79■□□□□ 0.44
RARAP10276 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RARAP10276 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RARAP10276 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
RARAP10276 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RARAP10276 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.79■□□□□ 0.44
RARAP10276 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
RARAP10276 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.79■□□□□ 0.44
RARAP10276 AC026691.1-201ENST00000602502 2017 ntBASIC17.79■□□□□ 0.44
RARAP10276 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
RARAP10276 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.79■□□□□ 0.44
RARAP10276 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.79■□□□□ 0.44
RARAP10276 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
RARAP10276 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms