Protein–RNA interactions for Protein: P0DMR1

HNRNPCL4, Heterogeneous nuclear ribonucleoprotein C-like 4, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPCL4P0DMR1 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HNRNPCL4P0DMR1 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HNRNPCL4P0DMR1 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HNRNPCL4P0DMR1 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
HNRNPCL4P0DMR1 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HNRNPCL4P0DMR1 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HNRNPCL4P0DMR1 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.78■□□□□ 0.12
HNRNPCL4P0DMR1 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HNRNPCL4P0DMR1 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HNRNPCL4P0DMR1 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HNRNPCL4P0DMR1 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HNRNPCL4P0DMR1 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HNRNPCL4P0DMR1 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.78■□□□□ 0.12
HNRNPCL4P0DMR1 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.78■□□□□ 0.12
HNRNPCL4P0DMR1 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HNRNPCL4P0DMR1 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.78■□□□□ 0.12
HNRNPCL4P0DMR1 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.78■□□□□ 0.12
HNRNPCL4P0DMR1 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.78■□□□□ 0.12
HNRNPCL4P0DMR1 AL445228.2-201ENST00000605589 952 ntBASIC15.78■□□□□ 0.12
HNRNPCL4P0DMR1 AC093458.2-201ENST00000623150 629 ntBASIC15.78■□□□□ 0.12
HNRNPCL4P0DMR1 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.78■□□□□ 0.12
HNRNPCL4P0DMR1 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.78■□□□□ 0.12
HNRNPCL4P0DMR1 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.78■□□□□ 0.12
HNRNPCL4P0DMR1 AL022326.1-202ENST00000641533 845 ntBASIC15.78■□□□□ 0.12
HNRNPCL4P0DMR1 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.78■□□□□ 0.12
HNRNPCL4P0DMR1 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.78■□□□□ 0.12
HNRNPCL4P0DMR1 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HNRNPCL4P0DMR1 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HNRNPCL4P0DMR1 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
HNRNPCL4P0DMR1 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HNRNPCL4P0DMR1 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HNRNPCL4P0DMR1 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HNRNPCL4P0DMR1 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.78■□□□□ 0.12
HNRNPCL4P0DMR1 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HNRNPCL4P0DMR1 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.78■□□□□ 0.12
HNRNPCL4P0DMR1 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HNRNPCL4P0DMR1 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HNRNPCL4P0DMR1 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HNRNPCL4P0DMR1 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HNRNPCL4P0DMR1 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HNRNPCL4P0DMR1 AL391005.1-201ENST00000623953 2435 ntBASIC15.77■□□□□ 0.12
HNRNPCL4P0DMR1 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
HNRNPCL4P0DMR1 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.77■□□□□ 0.12
HNRNPCL4P0DMR1 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HNRNPCL4P0DMR1 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HNRNPCL4P0DMR1 AC092171.3-201ENST00000610122 2651 ntBASIC15.77■□□□□ 0.12
HNRNPCL4P0DMR1 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.77■□□□□ 0.12
HNRNPCL4P0DMR1 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HNRNPCL4P0DMR1 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HNRNPCL4P0DMR1 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HNRNPCL4P0DMR1 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HNRNPCL4P0DMR1 LINC00895-201ENST00000629028 1637 ntBASIC15.77■□□□□ 0.12
HNRNPCL4P0DMR1 AC046158.3-201ENST00000624947 2558 ntBASIC15.77■□□□□ 0.12
HNRNPCL4P0DMR1 RBM17P3-201ENST00000417687 1192 ntBASIC15.77■□□□□ 0.12
HNRNPCL4P0DMR1 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.77■□□□□ 0.12
HNRNPCL4P0DMR1 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
HNRNPCL4P0DMR1 TERC-201ENST00000602385 541 ntBASIC15.77■□□□□ 0.12
HNRNPCL4P0DMR1 HLA-A-202ENST00000376806 1854 ntBASIC15.77■□□□□ 0.11
HNRNPCL4P0DMR1 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
HNRNPCL4P0DMR1 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
HNRNPCL4P0DMR1 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
HNRNPCL4P0DMR1 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.77■□□□□ 0.11
HNRNPCL4P0DMR1 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.11
HNRNPCL4P0DMR1 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.11
HNRNPCL4P0DMR1 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.77■□□□□ 0.11
HNRNPCL4P0DMR1 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
HNRNPCL4P0DMR1 KRT8P49-201ENST00000604166 1432 ntBASIC15.77■□□□□ 0.11
HNRNPCL4P0DMR1 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
HNRNPCL4P0DMR1 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HNRNPCL4P0DMR1 AC243591.1-201ENST00000452967 1364 ntBASIC15.76■□□□□ 0.11
HNRNPCL4P0DMR1 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HNRNPCL4P0DMR1 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HNRNPCL4P0DMR1 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HNRNPCL4P0DMR1 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HNRNPCL4P0DMR1 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
HNRNPCL4P0DMR1 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HNRNPCL4P0DMR1 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HNRNPCL4P0DMR1 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HNRNPCL4P0DMR1 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HNRNPCL4P0DMR1 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
HNRNPCL4P0DMR1 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
HNRNPCL4P0DMR1 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HNRNPCL4P0DMR1 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HNRNPCL4P0DMR1 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HNRNPCL4P0DMR1 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.76■□□□□ 0.11
HNRNPCL4P0DMR1 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HNRNPCL4P0DMR1 BX005266.1-201ENST00000473402 457 ntBASIC15.76■□□□□ 0.11
HNRNPCL4P0DMR1 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
HNRNPCL4P0DMR1 FOSL1P1-201ENST00000511041 816 ntBASIC15.76■□□□□ 0.11
HNRNPCL4P0DMR1 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.76■□□□□ 0.11
HNRNPCL4P0DMR1 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
HNRNPCL4P0DMR1 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.76■□□□□ 0.11
HNRNPCL4P0DMR1 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.76■□□□□ 0.11
HNRNPCL4P0DMR1 AL139288.1-201ENST00000623748 933 ntBASIC15.76■□□□□ 0.11
HNRNPCL4P0DMR1 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
HNRNPCL4P0DMR1 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HNRNPCL4P0DMR1 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
HNRNPCL4P0DMR1 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.76■□□□□ 0.11
HNRNPCL4P0DMR1 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HNRNPCL4P0DMR1 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms