Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCNYL3P0C7X3 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCNYL3P0C7X3 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCNYL3P0C7X3 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCNYL3P0C7X3 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.42■□□□□ 0.22
CCNYL3P0C7X3 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCNYL3P0C7X3 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CCNYL3P0C7X3 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCNYL3P0C7X3 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCNYL3P0C7X3 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCNYL3P0C7X3 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCNYL3P0C7X3 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCNYL3P0C7X3 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CCNYL3P0C7X3 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCNYL3P0C7X3 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
CCNYL3P0C7X3 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCNYL3P0C7X3 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.41■□□□□ 0.22
CCNYL3P0C7X3 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCNYL3P0C7X3 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCNYL3P0C7X3 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCNYL3P0C7X3 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CCNYL3P0C7X3 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCNYL3P0C7X3 LINC00982-205ENST00000420957 435 ntBASIC16.41■□□□□ 0.22
CCNYL3P0C7X3 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CCNYL3P0C7X3 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.41■□□□□ 0.22
CCNYL3P0C7X3 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.41■□□□□ 0.22
CCNYL3P0C7X3 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.41■□□□□ 0.22
CCNYL3P0C7X3 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.41■□□□□ 0.22
CCNYL3P0C7X3 AC010654.1-201ENST00000615722 808 ntBASIC16.41■□□□□ 0.22
CCNYL3P0C7X3 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCNYL3P0C7X3 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCNYL3P0C7X3 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCNYL3P0C7X3 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCNYL3P0C7X3 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CCNYL3P0C7X3 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCNYL3P0C7X3 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.41■□□□□ 0.22
CCNYL3P0C7X3 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCNYL3P0C7X3 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.41■□□□□ 0.22
CCNYL3P0C7X3 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.41■□□□□ 0.22
CCNYL3P0C7X3 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCNYL3P0C7X3 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCNYL3P0C7X3 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCNYL3P0C7X3 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.41■□□□□ 0.22
CCNYL3P0C7X3 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCNYL3P0C7X3 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
CCNYL3P0C7X3 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.4■□□□□ 0.22
CCNYL3P0C7X3 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCNYL3P0C7X3 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CCNYL3P0C7X3 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.4■□□□□ 0.22
CCNYL3P0C7X3 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.4■□□□□ 0.22
CCNYL3P0C7X3 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.4■□□□□ 0.22
CCNYL3P0C7X3 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCNYL3P0C7X3 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.4■□□□□ 0.22
CCNYL3P0C7X3 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCNYL3P0C7X3 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCNYL3P0C7X3 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCNYL3P0C7X3 LINC00304-203ENST00000565008 1864 ntBASIC16.4■□□□□ 0.22
CCNYL3P0C7X3 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCNYL3P0C7X3 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCNYL3P0C7X3 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.4■□□□□ 0.22
CCNYL3P0C7X3 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
CCNYL3P0C7X3 AP002414.1-201ENST00000391405 1147 ntBASIC16.4■□□□□ 0.22
CCNYL3P0C7X3 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCNYL3P0C7X3 PTCHD3P3-201ENST00000403073 906 ntBASIC16.4■□□□□ 0.22
CCNYL3P0C7X3 HCG4B-203ENST00000450128 991 ntBASIC16.4■□□□□ 0.22
CCNYL3P0C7X3 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
CCNYL3P0C7X3 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.4■□□□□ 0.22
CCNYL3P0C7X3 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCNYL3P0C7X3 LINC01451-201ENST00000623792 534 ntBASIC16.4■□□□□ 0.22
CCNYL3P0C7X3 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCNYL3P0C7X3 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCNYL3P0C7X3 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.4■□□□□ 0.22
CCNYL3P0C7X3 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CCNYL3P0C7X3 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.4■□□□□ 0.22
CCNYL3P0C7X3 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCNYL3P0C7X3 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCNYL3P0C7X3 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCNYL3P0C7X3 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.4■□□□□ 0.22
CCNYL3P0C7X3 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CCNYL3P0C7X3 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CCNYL3P0C7X3 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.4■□□□□ 0.22
CCNYL3P0C7X3 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCNYL3P0C7X3 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CCNYL3P0C7X3 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CCNYL3P0C7X3 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
CCNYL3P0C7X3 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCNYL3P0C7X3 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.39■□□□□ 0.21
CCNYL3P0C7X3 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CCNYL3P0C7X3 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCNYL3P0C7X3 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCNYL3P0C7X3 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCNYL3P0C7X3 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCNYL3P0C7X3 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCNYL3P0C7X3 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CCNYL3P0C7X3 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCNYL3P0C7X3 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCNYL3P0C7X3 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCNYL3P0C7X3 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCNYL3P0C7X3 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
CCNYL3P0C7X3 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms