Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 AL671277.1-201ENST00000429656 993 ntBASIC18.96■□□□□ 0.63
CYP3A4P08684 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CYP3A4P08684 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.96■□□□□ 0.63
CYP3A4P08684 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CYP3A4P08684 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.96■□□□□ 0.63
CYP3A4P08684 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.96■□□□□ 0.63
CYP3A4P08684 FAM86C2P-203ENST00000528684 1004 ntBASIC18.96■□□□□ 0.63
CYP3A4P08684 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC18.96■□□□□ 0.63
CYP3A4P08684 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.96■□□□□ 0.63
CYP3A4P08684 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CYP3A4P08684 AL691403.2-201ENST00000618460 490 ntBASIC18.96■□□□□ 0.63
CYP3A4P08684 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC18.96■□□□□ 0.63
CYP3A4P08684 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
CYP3A4P08684 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CYP3A4P08684 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CYP3A4P08684 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CYP3A4P08684 AKAP8P1-201ENST00000434743 1349 ntBASIC18.96■□□□□ 0.63
CYP3A4P08684 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC18.96■□□□□ 0.63
CYP3A4P08684 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.96■□□□□ 0.63
CYP3A4P08684 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CYP3A4P08684 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CYP3A4P08684 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CYP3A4P08684 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.95■□□□□ 0.62
CYP3A4P08684 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CYP3A4P08684 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CYP3A4P08684 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CYP3A4P08684 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.95■□□□□ 0.62
CYP3A4P08684 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CYP3A4P08684 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CYP3A4P08684 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CYP3A4P08684 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CYP3A4P08684 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CYP3A4P08684 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.95■□□□□ 0.62
CYP3A4P08684 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CYP3A4P08684 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.95■□□□□ 0.62
CYP3A4P08684 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.95■□□□□ 0.62
CYP3A4P08684 AC254562.1-201ENST00000417586 456 ntBASIC18.95■□□□□ 0.62
CYP3A4P08684 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.95■□□□□ 0.62
CYP3A4P08684 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.95■□□□□ 0.62
CYP3A4P08684 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.95■□□□□ 0.62
CYP3A4P08684 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CYP3A4P08684 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.95■□□□□ 0.62
CYP3A4P08684 RARRES2P8-201ENST00000566335 367 ntBASIC18.95■□□□□ 0.62
CYP3A4P08684 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CYP3A4P08684 AC105339.1-204ENST00000636249 355 ntBASIC18.95■□□□□ 0.62
CYP3A4P08684 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CYP3A4P08684 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CYP3A4P08684 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CYP3A4P08684 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CYP3A4P08684 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.95■□□□□ 0.62
CYP3A4P08684 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CYP3A4P08684 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CYP3A4P08684 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CYP3A4P08684 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CYP3A4P08684 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.95■□□□□ 0.62
CYP3A4P08684 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CYP3A4P08684 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.95■□□□□ 0.62
CYP3A4P08684 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CYP3A4P08684 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CYP3A4P08684 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CYP3A4P08684 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CYP3A4P08684 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CYP3A4P08684 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CYP3A4P08684 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
CYP3A4P08684 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CYP3A4P08684 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CYP3A4P08684 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CYP3A4P08684 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.94■□□□□ 0.62
CYP3A4P08684 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CYP3A4P08684 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CYP3A4P08684 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CYP3A4P08684 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.94■□□□□ 0.62
CYP3A4P08684 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CYP3A4P08684 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.94■□□□□ 0.62
CYP3A4P08684 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CYP3A4P08684 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.94■□□□□ 0.62
CYP3A4P08684 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.94■□□□□ 0.62
CYP3A4P08684 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.94■□□□□ 0.62
CYP3A4P08684 AL513210.1-201ENST00000629608 234 ntBASIC18.94■□□□□ 0.62
CYP3A4P08684 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.94■□□□□ 0.62
CYP3A4P08684 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CYP3A4P08684 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CYP3A4P08684 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.94■□□□□ 0.62
CYP3A4P08684 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CYP3A4P08684 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CYP3A4P08684 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
CYP3A4P08684 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CYP3A4P08684 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CYP3A4P08684 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CYP3A4P08684 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CYP3A4P08684 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CYP3A4P08684 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
CYP3A4P08684 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CYP3A4P08684 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CYP3A4P08684 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CYP3A4P08684 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.93■□□□□ 0.62
CYP3A4P08684 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CYP3A4P08684 AC012313.1-201ENST00000593393 3059 ntBASIC18.93■□□□□ 0.62
CYP3A4P08684 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CYP3A4P08684 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms