Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CAPN1P07384 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CAPN1P07384 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CAPN1P07384 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CAPN1P07384 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.74■□□□□ 0.27
CAPN1P07384 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CAPN1P07384 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.74■□□□□ 0.27
CAPN1P07384 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.74■□□□□ 0.27
CAPN1P07384 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
CAPN1P07384 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.74■□□□□ 0.27
CAPN1P07384 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CAPN1P07384 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CAPN1P07384 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.74■□□□□ 0.27
CAPN1P07384 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.74■□□□□ 0.27
CAPN1P07384 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CAPN1P07384 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CAPN1P07384 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CAPN1P07384 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CAPN1P07384 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.74■□□□□ 0.27
CAPN1P07384 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
CAPN1P07384 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CAPN1P07384 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CAPN1P07384 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CAPN1P07384 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.74■□□□□ 0.27
CAPN1P07384 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
CAPN1P07384 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CAPN1P07384 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.74■□□□□ 0.27
CAPN1P07384 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.74■□□□□ 0.27
CAPN1P07384 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.74■□□□□ 0.27
CAPN1P07384 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.74■□□□□ 0.27
CAPN1P07384 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.74■□□□□ 0.27
CAPN1P07384 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
CAPN1P07384 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CAPN1P07384 AC023511.2-201ENST00000618803 211 ntBASIC16.74■□□□□ 0.27
CAPN1P07384 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.74■□□□□ 0.27
CAPN1P07384 AD001527.2-201ENST00000622994 785 ntBASIC16.74■□□□□ 0.27
CAPN1P07384 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.74■□□□□ 0.27
CAPN1P07384 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CAPN1P07384 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CAPN1P07384 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CAPN1P07384 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CAPN1P07384 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CAPN1P07384 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CAPN1P07384 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CAPN1P07384 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.74■□□□□ 0.27
CAPN1P07384 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.74■□□□□ 0.27
CAPN1P07384 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CAPN1P07384 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CAPN1P07384 PCDHA14-201ENST00000506751 2298 ntBASIC16.73■□□□□ 0.27
CAPN1P07384 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CAPN1P07384 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CAPN1P07384 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CAPN1P07384 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CAPN1P07384 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CAPN1P07384 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CAPN1P07384 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.73■□□□□ 0.27
CAPN1P07384 AC003669.1-201ENST00000334569 611 ntBASIC16.73■□□□□ 0.27
CAPN1P07384 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CAPN1P07384 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.73■□□□□ 0.27
CAPN1P07384 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CAPN1P07384 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.73■□□□□ 0.27
CAPN1P07384 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.73■□□□□ 0.27
CAPN1P07384 AC093909.1-201ENST00000504731 1122 ntBASIC16.73■□□□□ 0.27
CAPN1P07384 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.73■□□□□ 0.27
CAPN1P07384 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CAPN1P07384 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.73■□□□□ 0.27
CAPN1P07384 AC124947.2-201ENST00000547118 1133 ntBASIC16.73■□□□□ 0.27
CAPN1P07384 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CAPN1P07384 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.73■□□□□ 0.27
CAPN1P07384 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.73■□□□□ 0.27
CAPN1P07384 AC025062.2-201ENST00000605477 670 ntBASIC16.73■□□□□ 0.27
CAPN1P07384 AC116407.3-201ENST00000623905 1129 ntBASIC16.73■□□□□ 0.27
CAPN1P07384 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CAPN1P07384 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CAPN1P07384 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.73■□□□□ 0.27
CAPN1P07384 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CAPN1P07384 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CAPN1P07384 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CAPN1P07384 UBALD1-205ENST00000590891 2641 ntBASIC16.73■□□□□ 0.27
CAPN1P07384 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CAPN1P07384 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.73■□□□□ 0.27
CAPN1P07384 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.73■□□□□ 0.27
CAPN1P07384 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CAPN1P07384 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CAPN1P07384 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CAPN1P07384 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CAPN1P07384 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CAPN1P07384 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CAPN1P07384 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
CAPN1P07384 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CAPN1P07384 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.72■□□□□ 0.27
CAPN1P07384 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.72■□□□□ 0.27
CAPN1P07384 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CAPN1P07384 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.72■□□□□ 0.27
CAPN1P07384 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CAPN1P07384 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CAPN1P07384 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CAPN1P07384 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CAPN1P07384 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CAPN1P07384 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms