Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
POLR3DP05423 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
POLR3DP05423 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
POLR3DP05423 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
POLR3DP05423 NEK7-201ENST00000367383 586 ntTSL 2 BASIC20.23■□□□□ 0.83
POLR3DP05423 SLC25A1P3-201ENST00000395415 828 ntBASIC20.23■□□□□ 0.83
POLR3DP05423 DDT-204ENST00000404092 805 ntTSL 3 BASIC20.23■□□□□ 0.83
POLR3DP05423 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
POLR3DP05423 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
POLR3DP05423 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
POLR3DP05423 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC20.23■□□□□ 0.83
POLR3DP05423 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
POLR3DP05423 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC20.23■□□□□ 0.83
POLR3DP05423 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
POLR3DP05423 NF2-208ENST00000403435 2568 ntTSL 5 BASIC20.23■□□□□ 0.83
POLR3DP05423 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC20.23■□□□□ 0.83
POLR3DP05423 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
POLR3DP05423 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
POLR3DP05423 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC20.22■□□□□ 0.83
POLR3DP05423 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
POLR3DP05423 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
POLR3DP05423 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC20.22■□□□□ 0.83
POLR3DP05423 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
POLR3DP05423 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
POLR3DP05423 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
POLR3DP05423 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
POLR3DP05423 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC20.22■□□□□ 0.83
POLR3DP05423 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
POLR3DP05423 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
POLR3DP05423 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
POLR3DP05423 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC20.22■□□□□ 0.83
POLR3DP05423 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC20.22■□□□□ 0.83
POLR3DP05423 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC20.22■□□□□ 0.83
POLR3DP05423 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
POLR3DP05423 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
POLR3DP05423 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC20.22■□□□□ 0.83
POLR3DP05423 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC20.22■□□□□ 0.83
POLR3DP05423 AL031432.2-201ENST00000566714 459 ntBASIC20.22■□□□□ 0.83
POLR3DP05423 AL928711.1-201ENST00000570165 459 ntBASIC20.22■□□□□ 0.83
POLR3DP05423 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC20.22■□□□□ 0.83
POLR3DP05423 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC20.22■□□□□ 0.83
POLR3DP05423 AC091812.2-201ENST00000619081 385 ntBASIC20.22■□□□□ 0.83
POLR3DP05423 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
POLR3DP05423 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
POLR3DP05423 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
POLR3DP05423 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
POLR3DP05423 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
POLR3DP05423 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
POLR3DP05423 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC20.22■□□□□ 0.83
POLR3DP05423 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
POLR3DP05423 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
POLR3DP05423 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
POLR3DP05423 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
POLR3DP05423 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
POLR3DP05423 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
POLR3DP05423 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
POLR3DP05423 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC20.22■□□□□ 0.83
POLR3DP05423 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
POLR3DP05423 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
POLR3DP05423 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC20.21■□□□□ 0.83
POLR3DP05423 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
POLR3DP05423 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
POLR3DP05423 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
POLR3DP05423 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
POLR3DP05423 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC20.21■□□□□ 0.83
POLR3DP05423 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC20.21■□□□□ 0.83
POLR3DP05423 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC20.21■□□□□ 0.83
POLR3DP05423 AP006288.1-201ENST00000446065 395 ntBASIC20.21■□□□□ 0.83
POLR3DP05423 URGCP-206ENST00000446958 365 ntTSL 2 BASIC20.21■□□□□ 0.83
POLR3DP05423 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
POLR3DP05423 SNHG9-202ENST00000564014 471 ntBASIC20.21■□□□□ 0.83
POLR3DP05423 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC20.21■□□□□ 0.83
POLR3DP05423 REXO1L3P-201ENST00000622202 1288 ntBASIC20.21■□□□□ 0.83
POLR3DP05423 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
POLR3DP05423 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
POLR3DP05423 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC20.21■□□□□ 0.83
POLR3DP05423 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC20.21■□□□□ 0.83
POLR3DP05423 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
POLR3DP05423 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
POLR3DP05423 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.83
POLR3DP05423 AC092919.2-201ENST00000623631 1645 ntBASIC20.2■□□□□ 0.82
POLR3DP05423 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
POLR3DP05423 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
POLR3DP05423 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC20.2■□□□□ 0.82
POLR3DP05423 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
POLR3DP05423 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
POLR3DP05423 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
POLR3DP05423 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC20.2■□□□□ 0.82
POLR3DP05423 AC116353.5-201ENST00000638148 1699 ntBASIC20.2■□□□□ 0.82
POLR3DP05423 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
POLR3DP05423 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
POLR3DP05423 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
POLR3DP05423 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
POLR3DP05423 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC20.2■□□□□ 0.82
POLR3DP05423 FALEC-201ENST00000416894 566 ntTSL 3 BASIC20.2■□□□□ 0.82
POLR3DP05423 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC20.2■□□□□ 0.82
POLR3DP05423 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC20.2■□□□□ 0.82
POLR3DP05423 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
POLR3DP05423 NMU-203ENST00000507338 658 ntTSL 3 BASIC20.2■□□□□ 0.82
POLR3DP05423 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms