Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNA1P02708 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNA1P02708 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNA1P02708 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNA1P02708 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CHRNA1P02708 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CHRNA1P02708 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHRNA1P02708 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.3■□□□□ 0.52
CHRNA1P02708 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHRNA1P02708 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHRNA1P02708 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CHRNA1P02708 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.3■□□□□ 0.52
CHRNA1P02708 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHRNA1P02708 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHRNA1P02708 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHRNA1P02708 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHRNA1P02708 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHRNA1P02708 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHRNA1P02708 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHRNA1P02708 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CHRNA1P02708 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC18.3■□□□□ 0.52
CHRNA1P02708 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHRNA1P02708 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.3■□□□□ 0.52
CHRNA1P02708 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC18.3■□□□□ 0.52
CHRNA1P02708 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CHRNA1P02708 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
CHRNA1P02708 TERF1P3-201ENST00000505638 1227 ntBASIC18.3■□□□□ 0.52
CHRNA1P02708 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.3■□□□□ 0.52
CHRNA1P02708 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC18.3■□□□□ 0.52
CHRNA1P02708 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHRNA1P02708 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.3■□□□□ 0.52
CHRNA1P02708 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.3■□□□□ 0.52
CHRNA1P02708 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC18.3■□□□□ 0.52
CHRNA1P02708 AC073389.1-201ENST00000595595 795 ntBASIC18.3■□□□□ 0.52
CHRNA1P02708 LINC02560-201ENST00000596379 459 ntBASIC18.3■□□□□ 0.52
CHRNA1P02708 YTHDF3-AS1-201ENST00000603538 718 ntBASIC18.3■□□□□ 0.52
CHRNA1P02708 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHRNA1P02708 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.3■□□□□ 0.52
CHRNA1P02708 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.3■□□□□ 0.52
CHRNA1P02708 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHRNA1P02708 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHRNA1P02708 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CHRNA1P02708 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHRNA1P02708 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHRNA1P02708 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHRNA1P02708 CROCCP2-202ENST00000412962 2773 ntBASIC18.3■□□□□ 0.52
CHRNA1P02708 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHRNA1P02708 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.3■□□□□ 0.52
CHRNA1P02708 AP3S2-216ENST00000617003 1561 ntBASIC18.3■□□□□ 0.52
CHRNA1P02708 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHRNA1P02708 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHRNA1P02708 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHRNA1P02708 LINC02012-201ENST00000608206 1725 ntBASIC18.29■□□□□ 0.52
CHRNA1P02708 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.29■□□□□ 0.52
CHRNA1P02708 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHRNA1P02708 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC18.29■□□□□ 0.52
CHRNA1P02708 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.29■□□□□ 0.52
CHRNA1P02708 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHRNA1P02708 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHRNA1P02708 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHRNA1P02708 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.29■□□□□ 0.52
CHRNA1P02708 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHRNA1P02708 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHRNA1P02708 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.29■□□□□ 0.52
CHRNA1P02708 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.29■□□□□ 0.52
CHRNA1P02708 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHRNA1P02708 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.29■□□□□ 0.52
CHRNA1P02708 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18.29■□□□□ 0.52
CHRNA1P02708 AC105233.2-201ENST00000523697 349 ntBASIC18.29■□□□□ 0.52
CHRNA1P02708 AF228730.5-201ENST00000530288 346 ntBASIC18.29■□□□□ 0.52
CHRNA1P02708 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.29■□□□□ 0.52
CHRNA1P02708 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC18.29■□□□□ 0.52
CHRNA1P02708 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.29■□□□□ 0.52
CHRNA1P02708 AC008761.3-201ENST00000624803 892 ntBASIC18.29■□□□□ 0.52
CHRNA1P02708 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHRNA1P02708 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.29■□□□□ 0.52
CHRNA1P02708 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHRNA1P02708 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHRNA1P02708 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.29■□□□□ 0.52
CHRNA1P02708 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHRNA1P02708 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CHRNA1P02708 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CHRNA1P02708 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHRNA1P02708 FOXO1B-201ENST00000504678 1527 ntBASIC18.28■□□□□ 0.52
CHRNA1P02708 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHRNA1P02708 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHRNA1P02708 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHRNA1P02708 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHRNA1P02708 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHRNA1P02708 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHRNA1P02708 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CHRNA1P02708 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHRNA1P02708 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.28■□□□□ 0.52
CHRNA1P02708 AC092053.1-201ENST00000605787 1936 ntBASIC18.28■□□□□ 0.52
CHRNA1P02708 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.28■□□□□ 0.52
CHRNA1P02708 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CHRNA1P02708 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC18.28■□□□□ 0.52
CHRNA1P02708 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.28■□□□□ 0.52
CHRNA1P02708 FAM207CP-201ENST00000443486 507 ntBASIC18.28■□□□□ 0.52
CHRNA1P02708 AL512638.1-201ENST00000457493 794 ntBASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms