Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
KRT6AP02538 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT6AP02538 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT6AP02538 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT6AP02538 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.47■□□□□ 0.23
KRT6AP02538 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.47■□□□□ 0.23
KRT6AP02538 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
KRT6AP02538 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.47■□□□□ 0.23
KRT6AP02538 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
KRT6AP02538 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.47■□□□□ 0.23
KRT6AP02538 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.47■□□□□ 0.23
KRT6AP02538 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
KRT6AP02538 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
KRT6AP02538 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.47■□□□□ 0.23
KRT6AP02538 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.47■□□□□ 0.23
KRT6AP02538 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.47■□□□□ 0.23
KRT6AP02538 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
KRT6AP02538 AC018695.7-201ENST00000624587 2492 ntBASIC16.47■□□□□ 0.23
KRT6AP02538 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
KRT6AP02538 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT6AP02538 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.47■□□□□ 0.23
KRT6AP02538 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
KRT6AP02538 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT6AP02538 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
KRT6AP02538 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
KRT6AP02538 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.47■□□□□ 0.23
KRT6AP02538 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
KRT6AP02538 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.46■□□□□ 0.23
KRT6AP02538 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT6AP02538 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
KRT6AP02538 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT6AP02538 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
KRT6AP02538 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT6AP02538 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
KRT6AP02538 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.46■□□□□ 0.23
KRT6AP02538 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.46■□□□□ 0.23
KRT6AP02538 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
KRT6AP02538 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT6AP02538 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT6AP02538 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
KRT6AP02538 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
KRT6AP02538 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
KRT6AP02538 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
KRT6AP02538 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
KRT6AP02538 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
KRT6AP02538 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.46■□□□□ 0.23
KRT6AP02538 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
KRT6AP02538 PRYP5-201ENST00000451909 266 ntBASIC16.46■□□□□ 0.23
KRT6AP02538 AC132008.2-207ENST00000454517 770 ntBASIC16.46■□□□□ 0.23
KRT6AP02538 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
KRT6AP02538 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT6AP02538 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.46■□□□□ 0.23
KRT6AP02538 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.46■□□□□ 0.23
KRT6AP02538 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.46■□□□□ 0.23
KRT6AP02538 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT6AP02538 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
KRT6AP02538 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT6AP02538 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT6AP02538 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT6AP02538 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.46■□□□□ 0.23
KRT6AP02538 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT6AP02538 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
KRT6AP02538 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
KRT6AP02538 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
KRT6AP02538 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
KRT6AP02538 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.46■□□□□ 0.22
KRT6AP02538 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.46■□□□□ 0.22
KRT6AP02538 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.45■□□□□ 0.22
KRT6AP02538 AL603756.1-201ENST00000606511 2163 ntBASIC16.45■□□□□ 0.22
KRT6AP02538 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
KRT6AP02538 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRT6AP02538 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRT6AP02538 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
KRT6AP02538 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KRT6AP02538 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRT6AP02538 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.45■□□□□ 0.22
KRT6AP02538 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRT6AP02538 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRT6AP02538 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRT6AP02538 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRT6AP02538 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRT6AP02538 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRT6AP02538 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KRT6AP02538 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.45■□□□□ 0.22
KRT6AP02538 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KRT6AP02538 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.45■□□□□ 0.22
KRT6AP02538 AP001269.4-201ENST00000609611 512 ntBASIC16.45■□□□□ 0.22
KRT6AP02538 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRT6AP02538 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.45■□□□□ 0.22
KRT6AP02538 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRT6AP02538 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
KRT6AP02538 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KRT6AP02538 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.45■□□□□ 0.22
KRT6AP02538 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRT6AP02538 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KRT6AP02538 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRT6AP02538 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRT6AP02538 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KRT6AP02538 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.45■□□□□ 0.22
KRT6AP02538 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms