Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AC003101.2-201ENST00000612557 442 ntBASIC19.54■□□□□ 0.72
COL2A1P02458 TEX28P1-201ENST00000613479 1221 ntBASIC19.54■□□□□ 0.72
COL2A1P02458 TEX28P2-201ENST00000617764 1221 ntBASIC19.54■□□□□ 0.72
COL2A1P02458 AF228730.6-201ENST00000641497 218 ntBASIC19.54■□□□□ 0.72
COL2A1P02458 AC084121.3-201ENST00000641716 218 ntBASIC19.54■□□□□ 0.72
COL2A1P02458 AC105233.6-201ENST00000642093 218 ntBASIC19.54■□□□□ 0.72
COL2A1P02458 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL2A1P02458 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC19.54■□□□□ 0.72
COL2A1P02458 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC19.54■□□□□ 0.72
COL2A1P02458 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL2A1P02458 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COL2A1P02458 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COL2A1P02458 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC19.54■□□□□ 0.72
COL2A1P02458 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC19.54■□□□□ 0.72
COL2A1P02458 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC19.54■□□□□ 0.72
COL2A1P02458 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL2A1P02458 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
COL2A1P02458 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC19.54■□□□□ 0.72
COL2A1P02458 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL2A1P02458 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COL2A1P02458 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COL2A1P02458 CALY-202ENST00000368555 783 ntTSL 2 BASIC19.54■□□□□ 0.72
COL2A1P02458 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC19.54■□□□□ 0.72
COL2A1P02458 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC19.54■□□□□ 0.72
COL2A1P02458 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
COL2A1P02458 ZNF890P-202ENST00000530367 1156 ntBASIC19.54■□□□□ 0.72
COL2A1P02458 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC19.54■□□□□ 0.72
COL2A1P02458 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC19.54■□□□□ 0.72
COL2A1P02458 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COL2A1P02458 AL844908.2-201ENST00000609461 460 ntBASIC19.54■□□□□ 0.72
COL2A1P02458 AC009118.2-201ENST00000613275 655 ntBASIC19.54■□□□□ 0.72
COL2A1P02458 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COL2A1P02458 RAB34-223ENST00000636154 730 ntTSL 2 BASIC19.54■□□□□ 0.72
COL2A1P02458 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL2A1P02458 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
COL2A1P02458 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC19.53■□□□□ 0.72
COL2A1P02458 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
COL2A1P02458 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
COL2A1P02458 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
COL2A1P02458 AC092068.3-201ENST00000587894 2016 ntBASIC19.53■□□□□ 0.72
COL2A1P02458 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
COL2A1P02458 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL2A1P02458 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL2A1P02458 PC-204ENST00000524491 1714 ntTSL 2 BASIC19.53■□□□□ 0.72
COL2A1P02458 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
COL2A1P02458 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC19.53■□□□□ 0.72
COL2A1P02458 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC19.53■□□□□ 0.72
COL2A1P02458 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
COL2A1P02458 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL2A1P02458 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC19.53■□□□□ 0.72
COL2A1P02458 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
COL2A1P02458 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC19.53■□□□□ 0.72
COL2A1P02458 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC19.53■□□□□ 0.72
COL2A1P02458 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
COL2A1P02458 AC015922.1-201ENST00000421102 1152 ntBASIC19.53■□□□□ 0.72
COL2A1P02458 SERBP1P5-201ENST00000510079 1181 ntBASIC19.53■□□□□ 0.72
COL2A1P02458 AL133215.2-201ENST00000609242 977 ntBASIC19.53■□□□□ 0.72
COL2A1P02458 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
COL2A1P02458 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC19.53■□□□□ 0.72
COL2A1P02458 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
COL2A1P02458 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC19.53■□□□□ 0.72
COL2A1P02458 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL2A1P02458 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC19.52■□□□□ 0.72
COL2A1P02458 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
COL2A1P02458 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL2A1P02458 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
COL2A1P02458 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC19.52■□□□□ 0.72
COL2A1P02458 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC19.52■□□□□ 0.72
COL2A1P02458 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL2A1P02458 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC19.52■□□□□ 0.72
COL2A1P02458 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL2A1P02458 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
COL2A1P02458 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL2A1P02458 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL2A1P02458 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL2A1P02458 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
COL2A1P02458 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
COL2A1P02458 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL2A1P02458 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL2A1P02458 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL2A1P02458 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL2A1P02458 AL512638.1-201ENST00000457493 794 ntBASIC19.52■□□□□ 0.72
COL2A1P02458 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
COL2A1P02458 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC19.52■□□□□ 0.72
COL2A1P02458 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
COL2A1P02458 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC19.52■□□□□ 0.72
COL2A1P02458 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
COL2A1P02458 COQ6-210ENST00000554920 649 ntTSL 3 BASIC19.52■□□□□ 0.72
COL2A1P02458 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC19.52■□□□□ 0.72
COL2A1P02458 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL2A1P02458 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC19.52■□□□□ 0.72
COL2A1P02458 AC012645.4-201ENST00000610691 1061 ntBASIC19.52■□□□□ 0.72
COL2A1P02458 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC19.52■□□□□ 0.72
COL2A1P02458 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC19.52■□□□□ 0.72
COL2A1P02458 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL2A1P02458 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
COL2A1P02458 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
COL2A1P02458 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
COL2A1P02458 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
COL2A1P02458 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms