Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 SPDYE18-201ENST00000510091 1050 ntBASIC18.1■□□□□ 0.49
TIMP1P01033 AC055876.2-201ENST00000531834 546 ntBASIC18.1■□□□□ 0.49
TIMP1P01033 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.1■□□□□ 0.49
TIMP1P01033 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TIMP1P01033 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC18.1■□□□□ 0.49
TIMP1P01033 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TIMP1P01033 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TIMP1P01033 AL355312.1-201ENST00000407115 2176 ntBASIC18.1■□□□□ 0.49
TIMP1P01033 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.1■□□□□ 0.49
TIMP1P01033 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
TIMP1P01033 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TIMP1P01033 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.09■□□□□ 0.49
TIMP1P01033 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
TIMP1P01033 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TIMP1P01033 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
TIMP1P01033 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.09■□□□□ 0.49
TIMP1P01033 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TIMP1P01033 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18.09■□□□□ 0.49
TIMP1P01033 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TIMP1P01033 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
TIMP1P01033 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
TIMP1P01033 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TIMP1P01033 RBM39-205ENST00000397370 612 ntTSL 2 BASIC18.09■□□□□ 0.49
TIMP1P01033 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC18.09■□□□□ 0.49
TIMP1P01033 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TIMP1P01033 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.09■□□□□ 0.49
TIMP1P01033 RPL28-204ENST00000431533 590 ntTSL 2 BASIC18.09■□□□□ 0.49
TIMP1P01033 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC18.09■□□□□ 0.49
TIMP1P01033 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC18.09■□□□□ 0.49
TIMP1P01033 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
TIMP1P01033 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC18.09■□□□□ 0.49
TIMP1P01033 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC18.09■□□□□ 0.49
TIMP1P01033 RPL28-206ENST00000558752 671 ntTSL 3 BASIC18.09■□□□□ 0.49
TIMP1P01033 MIR4259-201ENST00000584466 101 ntBASIC18.09■□□□□ 0.49
TIMP1P01033 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.09■□□□□ 0.49
TIMP1P01033 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TIMP1P01033 AL033527.4-201ENST00000641026 673 ntBASIC18.09■□□□□ 0.49
TIMP1P01033 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TIMP1P01033 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TIMP1P01033 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.09■□□□□ 0.49
TIMP1P01033 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TIMP1P01033 AC093525.9-201ENST00000624961 1746 ntBASIC18.09■□□□□ 0.49
TIMP1P01033 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
TIMP1P01033 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC18.09■□□□□ 0.49
TIMP1P01033 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.09■□□□□ 0.49
TIMP1P01033 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.08■□□□□ 0.49
TIMP1P01033 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC18.08■□□□□ 0.49
TIMP1P01033 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
TIMP1P01033 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC18.08■□□□□ 0.49
TIMP1P01033 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.08■□□□□ 0.49
TIMP1P01033 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TIMP1P01033 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TIMP1P01033 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
TIMP1P01033 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TIMP1P01033 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TIMP1P01033 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TIMP1P01033 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TIMP1P01033 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TIMP1P01033 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC18.08■□□□□ 0.48
TIMP1P01033 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.08■□□□□ 0.48
TIMP1P01033 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
TIMP1P01033 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TIMP1P01033 MYCLP2-201ENST00000449268 967 ntBASIC18.08■□□□□ 0.48
TIMP1P01033 FUZ-207ENST00000526575 482 ntTSL 4 BASIC18.08■□□□□ 0.48
TIMP1P01033 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC18.08■□□□□ 0.48
TIMP1P01033 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC18.08■□□□□ 0.48
TIMP1P01033 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
TIMP1P01033 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TIMP1P01033 AC099568.2-201ENST00000609194 695 ntBASIC18.08■□□□□ 0.48
TIMP1P01033 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TIMP1P01033 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.08■□□□□ 0.48
TIMP1P01033 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.08■□□□□ 0.48
TIMP1P01033 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.08■□□□□ 0.48
TIMP1P01033 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
TIMP1P01033 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.08■□□□□ 0.48
TIMP1P01033 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TIMP1P01033 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TIMP1P01033 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TIMP1P01033 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TIMP1P01033 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
TIMP1P01033 FRMD8P1-201ENST00000440433 1524 ntBASIC18.08■□□□□ 0.48
TIMP1P01033 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
TIMP1P01033 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
TIMP1P01033 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
TIMP1P01033 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
TIMP1P01033 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.07■□□□□ 0.48
TIMP1P01033 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TIMP1P01033 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.07■□□□□ 0.48
TIMP1P01033 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.07■□□□□ 0.48
TIMP1P01033 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TIMP1P01033 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TIMP1P01033 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
TIMP1P01033 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TIMP1P01033 MEP1AP4-201ENST00000423244 1087 ntBASIC18.07■□□□□ 0.48
TIMP1P01033 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.07■□□□□ 0.48
TIMP1P01033 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC18.07■□□□□ 0.48
TIMP1P01033 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.07■□□□□ 0.48
TIMP1P01033 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TIMP1P01033 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.07■□□□□ 0.48
TIMP1P01033 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms