Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE6O95741 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE6O95741 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE6O95741 IGLL3P-201ENST00000412472 434 ntBASIC16.67■□□□□ 0.26
CPNE6O95741 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.67■□□□□ 0.26
CPNE6O95741 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.67■□□□□ 0.26
CPNE6O95741 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE6O95741 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE6O95741 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.67■□□□□ 0.26
CPNE6O95741 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.67■□□□□ 0.26
CPNE6O95741 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE6O95741 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE6O95741 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE6O95741 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE6O95741 PI4KAP1-204ENST00000612579 1703 ntBASIC16.67■□□□□ 0.26
CPNE6O95741 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE6O95741 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CPNE6O95741 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CPNE6O95741 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CPNE6O95741 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.67■□□□□ 0.26
CPNE6O95741 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.67■□□□□ 0.26
CPNE6O95741 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE6O95741 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE6O95741 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE6O95741 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CPNE6O95741 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE6O95741 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE6O95741 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CPNE6O95741 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE6O95741 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE6O95741 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE6O95741 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE6O95741 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.66■□□□□ 0.26
CPNE6O95741 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE6O95741 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE6O95741 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE6O95741 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CPNE6O95741 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.66■□□□□ 0.26
CPNE6O95741 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE6O95741 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.66■□□□□ 0.26
CPNE6O95741 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.66■□□□□ 0.26
CPNE6O95741 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.66■□□□□ 0.26
CPNE6O95741 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.66■□□□□ 0.26
CPNE6O95741 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
CPNE6O95741 MKNK2P1-201ENST00000437526 628 ntBASIC16.66■□□□□ 0.26
CPNE6O95741 ALG1L5P-201ENST00000482043 771 ntBASIC16.66■□□□□ 0.26
CPNE6O95741 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.66■□□□□ 0.26
CPNE6O95741 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE6O95741 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.66■□□□□ 0.26
CPNE6O95741 MIR4469-201ENST00000583919 79 ntBASIC16.66■□□□□ 0.26
CPNE6O95741 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.66■□□□□ 0.26
CPNE6O95741 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.66■□□□□ 0.26
CPNE6O95741 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CPNE6O95741 AL138688.1-201ENST00000624851 1594 ntBASIC16.66■□□□□ 0.26
CPNE6O95741 AC010507.1-201ENST00000633895 436 ntBASIC16.66■□□□□ 0.26
CPNE6O95741 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.66■□□□□ 0.26
CPNE6O95741 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.66■□□□□ 0.26
CPNE6O95741 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE6O95741 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE6O95741 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE6O95741 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.66■□□□□ 0.26
CPNE6O95741 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.66■□□□□ 0.26
CPNE6O95741 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CPNE6O95741 PKD1P1-201ENST00000458669 6805 ntBASIC16.65■□□□□ 0.26
CPNE6O95741 DOC2GP-204ENST00000639052 2548 ntBASIC16.65■□□□□ 0.26
CPNE6O95741 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE6O95741 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
CPNE6O95741 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE6O95741 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE6O95741 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE6O95741 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE6O95741 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE6O95741 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE6O95741 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.65■□□□□ 0.26
CPNE6O95741 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.65■□□□□ 0.26
CPNE6O95741 HTR5BP-201ENST00000430851 1154 ntBASIC16.65■□□□□ 0.26
CPNE6O95741 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.65■□□□□ 0.26
CPNE6O95741 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.65■□□□□ 0.26
CPNE6O95741 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.65■□□□□ 0.26
CPNE6O95741 PDPK2P-202ENST00000562415 1191 ntBASIC16.65■□□□□ 0.26
CPNE6O95741 SNHG9-202ENST00000564014 471 ntBASIC16.65■□□□□ 0.26
CPNE6O95741 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.65■□□□□ 0.26
CPNE6O95741 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
CPNE6O95741 AC004877.2-201ENST00000623941 599 ntBASIC16.65■□□□□ 0.26
CPNE6O95741 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE6O95741 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE6O95741 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE6O95741 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE6O95741 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE6O95741 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE6O95741 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.65■□□□□ 0.26
CPNE6O95741 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE6O95741 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE6O95741 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE6O95741 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CPNE6O95741 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE6O95741 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
CPNE6O95741 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE6O95741 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CPNE6O95741 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms