Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SIX6O95475 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SIX6O95475 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SIX6O95475 NCF1B-203ENST00000435988 1254 ntBASIC14.24□□□□□ -0.13
SIX6O95475 AC133681.1-201ENST00000465482 601 ntBASIC14.24□□□□□ -0.13
SIX6O95475 PPP1R14BP3-201ENST00000509033 445 ntBASIC14.24□□□□□ -0.13
SIX6O95475 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC14.24□□□□□ -0.13
SIX6O95475 AP003097.1-201ENST00000530657 1135 ntBASIC14.24□□□□□ -0.13
SIX6O95475 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SIX6O95475 RNF121-214ENST00000533380 870 ntTSL 3 BASIC14.24□□□□□ -0.13
SIX6O95475 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC14.24□□□□□ -0.13
SIX6O95475 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC14.24□□□□□ -0.13
SIX6O95475 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC14.24□□□□□ -0.13
SIX6O95475 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC14.24□□□□□ -0.13
SIX6O95475 IKBKGP1-201ENST00000612193 1073 ntBASIC14.24□□□□□ -0.13
SIX6O95475 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
SIX6O95475 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
SIX6O95475 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SIX6O95475 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.24□□□□□ -0.13
SIX6O95475 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SIX6O95475 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SIX6O95475 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SIX6O95475 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.24□□□□□ -0.13
SIX6O95475 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SIX6O95475 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SIX6O95475 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.24□□□□□ -0.13
SIX6O95475 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SIX6O95475 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SIX6O95475 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SIX6O95475 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.24□□□□□ -0.13
SIX6O95475 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SIX6O95475 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SIX6O95475 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SIX6O95475 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SIX6O95475 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC14.24□□□□□ -0.13
SIX6O95475 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SIX6O95475 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.24□□□□□ -0.13
SIX6O95475 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SIX6O95475 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SIX6O95475 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SIX6O95475 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SIX6O95475 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SIX6O95475 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SIX6O95475 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.23□□□□□ -0.13
SIX6O95475 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SIX6O95475 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SIX6O95475 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SIX6O95475 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SIX6O95475 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.23□□□□□ -0.13
SIX6O95475 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SIX6O95475 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SIX6O95475 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SIX6O95475 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SIX6O95475 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SIX6O95475 ILF2-202ENST00000368681 726 ntTSL 2 BASIC14.23□□□□□ -0.13
SIX6O95475 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SIX6O95475 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SIX6O95475 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SIX6O95475 AL353807.1-201ENST00000427475 662 ntBASIC14.23□□□□□ -0.13
SIX6O95475 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SIX6O95475 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SIX6O95475 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC14.23□□□□□ -0.13
SIX6O95475 TMED1-207ENST00000591695 809 ntTSL 5 BASIC14.23□□□□□ -0.13
SIX6O95475 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC14.23□□□□□ -0.13
SIX6O95475 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC14.23□□□□□ -0.13
SIX6O95475 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SIX6O95475 AC073195.1-201ENST00000607241 877 ntBASIC14.23□□□□□ -0.13
SIX6O95475 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SIX6O95475 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SIX6O95475 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.23□□□□□ -0.13
SIX6O95475 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SIX6O95475 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SIX6O95475 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.23□□□□□ -0.13
SIX6O95475 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.23□□□□□ -0.13
SIX6O95475 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SIX6O95475 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SIX6O95475 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SIX6O95475 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SIX6O95475 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.23□□□□□ -0.13
SIX6O95475 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SIX6O95475 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SIX6O95475 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SIX6O95475 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SIX6O95475 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SIX6O95475 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.22□□□□□ -0.13
SIX6O95475 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
SIX6O95475 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SIX6O95475 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.22□□□□□ -0.13
SIX6O95475 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC14.22□□□□□ -0.13
SIX6O95475 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SIX6O95475 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
SIX6O95475 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.22□□□□□ -0.13
SIX6O95475 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
SIX6O95475 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SIX6O95475 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SIX6O95475 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SIX6O95475 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SIX6O95475 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SIX6O95475 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SIX6O95475 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms