Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.06■□□□□ 0.32
VAPBO95292 AL589182.2-201ENST00000619332 1049 ntBASIC17.06■□□□□ 0.32
VAPBO95292 AC012313.10-201ENST00000623509 926 ntBASIC17.06■□□□□ 0.32
VAPBO95292 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
VAPBO95292 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.06■□□□□ 0.32
VAPBO95292 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
VAPBO95292 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
VAPBO95292 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
VAPBO95292 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
VAPBO95292 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VAPBO95292 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VAPBO95292 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VAPBO95292 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.06■□□□□ 0.32
VAPBO95292 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VAPBO95292 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VAPBO95292 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.06■□□□□ 0.32
VAPBO95292 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VAPBO95292 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.06■□□□□ 0.32
VAPBO95292 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
VAPBO95292 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
VAPBO95292 AC008894.3-201ENST00000624324 3103 ntBASIC17.05■□□□□ 0.32
VAPBO95292 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VAPBO95292 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VAPBO95292 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VAPBO95292 AL021920.2-201ENST00000624828 1351 ntBASIC17.05■□□□□ 0.32
VAPBO95292 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
VAPBO95292 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.05■□□□□ 0.32
VAPBO95292 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VAPBO95292 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.05■□□□□ 0.32
VAPBO95292 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
VAPBO95292 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
VAPBO95292 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.05■□□□□ 0.32
VAPBO95292 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
VAPBO95292 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.05■□□□□ 0.32
VAPBO95292 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.05■□□□□ 0.32
VAPBO95292 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.05■□□□□ 0.32
VAPBO95292 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.05■□□□□ 0.32
VAPBO95292 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.05■□□□□ 0.32
VAPBO95292 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.05■□□□□ 0.32
VAPBO95292 CLEC4GP1-201ENST00000596555 870 ntBASIC17.05■□□□□ 0.32
VAPBO95292 AL139424.1-201ENST00000607572 797 ntBASIC17.05■□□□□ 0.32
VAPBO95292 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
VAPBO95292 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VAPBO95292 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VAPBO95292 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
VAPBO95292 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
VAPBO95292 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
VAPBO95292 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VAPBO95292 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VAPBO95292 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
VAPBO95292 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.05■□□□□ 0.32
VAPBO95292 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VAPBO95292 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
VAPBO95292 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.05■□□□□ 0.32
VAPBO95292 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.05■□□□□ 0.32
VAPBO95292 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
VAPBO95292 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VAPBO95292 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VAPBO95292 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.05■□□□□ 0.32
VAPBO95292 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VAPBO95292 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.04■□□□□ 0.32
VAPBO95292 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VAPBO95292 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
VAPBO95292 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
VAPBO95292 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VAPBO95292 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.04■□□□□ 0.32
VAPBO95292 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.04■□□□□ 0.32
VAPBO95292 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VAPBO95292 AL603756.1-201ENST00000606511 2163 ntBASIC17.04■□□□□ 0.32
VAPBO95292 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VAPBO95292 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VAPBO95292 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VAPBO95292 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VAPBO95292 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VAPBO95292 AKR1C7P-201ENST00000305623 895 ntBASIC17.04■□□□□ 0.32
VAPBO95292 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VAPBO95292 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.04■□□□□ 0.32
VAPBO95292 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VAPBO95292 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.04■□□□□ 0.32
VAPBO95292 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
VAPBO95292 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.04■□□□□ 0.32
VAPBO95292 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.04■□□□□ 0.32
VAPBO95292 AP002490.2-201ENST00000524791 560 ntBASIC17.04■□□□□ 0.32
VAPBO95292 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.04■□□□□ 0.32
VAPBO95292 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.04■□□□□ 0.32
VAPBO95292 AC139887.3-201ENST00000568585 713 ntBASIC17.04■□□□□ 0.32
VAPBO95292 TERC-201ENST00000602385 541 ntBASIC17.04■□□□□ 0.32
VAPBO95292 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
VAPBO95292 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VAPBO95292 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.04■□□□□ 0.32
VAPBO95292 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VAPBO95292 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.04■□□□□ 0.32
VAPBO95292 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VAPBO95292 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.04■□□□□ 0.32
VAPBO95292 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.04■□□□□ 0.32
VAPBO95292 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
VAPBO95292 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VAPBO95292 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.04■□□□□ 0.32
VAPBO95292 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
VAPBO95292 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms