Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
LTN1O94822 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
LTN1O94822 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
LTN1O94822 CU639417.3-201ENST00000624240 1404 ntBASIC22.13■■□□□ 1.13
LTN1O94822 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
LTN1O94822 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
LTN1O94822 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
LTN1O94822 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC22.13■■□□□ 1.13
LTN1O94822 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.13■■□□□ 1.13
LTN1O94822 AC087499.5-201ENST00000452760 1342 ntBASIC22.13■■□□□ 1.13
LTN1O94822 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
LTN1O94822 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC22.13■■□□□ 1.13
LTN1O94822 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
LTN1O94822 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC22.13■■□□□ 1.13
LTN1O94822 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC22.13■■□□□ 1.13
LTN1O94822 AC009407.1-201ENST00000568958 598 ntBASIC22.13■■□□□ 1.13
LTN1O94822 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC22.13■■□□□ 1.13
LTN1O94822 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC22.13■■□□□ 1.13
LTN1O94822 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
LTN1O94822 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
LTN1O94822 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
LTN1O94822 AC092068.3-201ENST00000587894 2016 ntBASIC22.13■■□□□ 1.13
LTN1O94822 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
LTN1O94822 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC22.13■■□□□ 1.13
LTN1O94822 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
LTN1O94822 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC22.13■■□□□ 1.13
LTN1O94822 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
LTN1O94822 AC006277.1-201ENST00000624348 1610 ntBASIC22.13■■□□□ 1.13
LTN1O94822 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
LTN1O94822 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
LTN1O94822 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
LTN1O94822 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC22.12■■□□□ 1.13
LTN1O94822 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
LTN1O94822 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC22.12■■□□□ 1.13
LTN1O94822 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC22.12■■□□□ 1.13
LTN1O94822 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC22.12■■□□□ 1.13
LTN1O94822 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
LTN1O94822 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC22.12■■□□□ 1.13
LTN1O94822 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
LTN1O94822 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
LTN1O94822 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
LTN1O94822 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
LTN1O94822 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
LTN1O94822 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC22.12■■□□□ 1.13
LTN1O94822 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
LTN1O94822 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC22.12■■□□□ 1.13
LTN1O94822 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC22.12■■□□□ 1.13
LTN1O94822 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC22.12■■□□□ 1.13
LTN1O94822 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC22.12■■□□□ 1.13
LTN1O94822 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
LTN1O94822 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
LTN1O94822 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
LTN1O94822 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.11■■□□□ 1.13
LTN1O94822 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
LTN1O94822 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
LTN1O94822 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC22.11■■□□□ 1.13
LTN1O94822 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
LTN1O94822 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
LTN1O94822 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC22.11■■□□□ 1.13
LTN1O94822 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
LTN1O94822 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
LTN1O94822 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
LTN1O94822 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
LTN1O94822 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC22.11■■□□□ 1.13
LTN1O94822 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC22.11■■□□□ 1.13
LTN1O94822 AC105021.1-202ENST00000570572 669 ntBASIC22.11■■□□□ 1.13
LTN1O94822 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC22.11■■□□□ 1.13
LTN1O94822 FHL2-212ENST00000607522 759 ntTSL 2 BASIC22.11■■□□□ 1.13
LTN1O94822 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC22.11■■□□□ 1.13
LTN1O94822 KRT8P39-201ENST00000396270 1433 ntBASIC22.11■■□□□ 1.13
LTN1O94822 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
LTN1O94822 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
LTN1O94822 AC067852.2-201ENST00000590513 2313 ntBASIC22.11■■□□□ 1.13
LTN1O94822 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC22.11■■□□□ 1.13
LTN1O94822 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC22.11■■□□□ 1.13
LTN1O94822 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC22.1■■□□□ 1.13
LTN1O94822 PP12613-201ENST00000424958 2230 ntBASIC22.1■■□□□ 1.13
LTN1O94822 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
LTN1O94822 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
LTN1O94822 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
LTN1O94822 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
LTN1O94822 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
LTN1O94822 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC22.1■■□□□ 1.13
LTN1O94822 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
LTN1O94822 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC22.1■■□□□ 1.13
LTN1O94822 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC22.1■■□□□ 1.13
LTN1O94822 GGT4P-201ENST00000623672 1708 ntBASIC22.1■■□□□ 1.13
LTN1O94822 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
LTN1O94822 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
LTN1O94822 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
LTN1O94822 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
LTN1O94822 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
LTN1O94822 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
LTN1O94822 PCDHB17P-201ENST00000539533 2393 ntBASIC22.1■■□□□ 1.13
LTN1O94822 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
LTN1O94822 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC22.1■■□□□ 1.13
LTN1O94822 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
LTN1O94822 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
LTN1O94822 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
LTN1O94822 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms