Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GPC4O75487 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.04■□□□□ 0.32
GPC4O75487 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.04■□□□□ 0.32
GPC4O75487 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.04■□□□□ 0.32
GPC4O75487 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
GPC4O75487 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC17.04■□□□□ 0.32
GPC4O75487 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GPC4O75487 AL356309.3-201ENST00000624132 1934 ntBASIC17.04■□□□□ 0.32
GPC4O75487 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GPC4O75487 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.04■□□□□ 0.32
GPC4O75487 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
GPC4O75487 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GPC4O75487 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GPC4O75487 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GPC4O75487 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GPC4O75487 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.04■□□□□ 0.32
GPC4O75487 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.04■□□□□ 0.32
GPC4O75487 AL450487.1-201ENST00000426799 995 ntBASIC17.04■□□□□ 0.32
GPC4O75487 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.04■□□□□ 0.32
GPC4O75487 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GPC4O75487 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.04■□□□□ 0.32
GPC4O75487 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.04■□□□□ 0.32
GPC4O75487 KRT126P-201ENST00000549467 1181 ntBASIC17.04■□□□□ 0.32
GPC4O75487 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.04■□□□□ 0.32
GPC4O75487 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.04■□□□□ 0.32
GPC4O75487 NKAPP1-205ENST00000585790 367 ntBASIC17.04■□□□□ 0.32
GPC4O75487 AL139288.1-201ENST00000623748 933 ntBASIC17.04■□□□□ 0.32
GPC4O75487 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.04■□□□□ 0.32
GPC4O75487 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
GPC4O75487 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GPC4O75487 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
GPC4O75487 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GPC4O75487 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
GPC4O75487 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GPC4O75487 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GPC4O75487 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.04■□□□□ 0.32
GPC4O75487 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GPC4O75487 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.04■□□□□ 0.32
GPC4O75487 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
GPC4O75487 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
GPC4O75487 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
GPC4O75487 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
GPC4O75487 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GPC4O75487 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.03■□□□□ 0.32
GPC4O75487 AC068587.6-202ENST00000641839 5619 ntBASIC17.03■□□□□ 0.32
GPC4O75487 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GPC4O75487 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GPC4O75487 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
GPC4O75487 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.03■□□□□ 0.32
GPC4O75487 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GPC4O75487 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.03■□□□□ 0.32
GPC4O75487 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
GPC4O75487 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GPC4O75487 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.03■□□□□ 0.32
GPC4O75487 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
GPC4O75487 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GPC4O75487 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GPC4O75487 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GPC4O75487 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
GPC4O75487 SLC25A1P3-201ENST00000395415 828 ntBASIC17.03■□□□□ 0.32
GPC4O75487 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.03■□□□□ 0.32
GPC4O75487 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
GPC4O75487 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GPC4O75487 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GPC4O75487 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.03■□□□□ 0.32
GPC4O75487 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.03■□□□□ 0.32
GPC4O75487 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GPC4O75487 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GPC4O75487 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.03■□□□□ 0.32
GPC4O75487 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
GPC4O75487 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.03■□□□□ 0.32
GPC4O75487 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GPC4O75487 AC004817.3-201ENST00000602957 2129 ntBASIC17.03■□□□□ 0.32
GPC4O75487 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GPC4O75487 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GPC4O75487 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GPC4O75487 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
GPC4O75487 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
GPC4O75487 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
GPC4O75487 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GPC4O75487 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
GPC4O75487 AC105020.1-201ENST00000435356 2205 ntBASIC17.02■□□□□ 0.32
GPC4O75487 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GPC4O75487 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
GPC4O75487 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
GPC4O75487 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GPC4O75487 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.02■□□□□ 0.32
GPC4O75487 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GPC4O75487 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GPC4O75487 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GPC4O75487 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
GPC4O75487 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GPC4O75487 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GPC4O75487 AC018695.7-201ENST00000624587 2492 ntBASIC17.02■□□□□ 0.32
GPC4O75487 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GPC4O75487 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.02■□□□□ 0.32
GPC4O75487 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GPC4O75487 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GPC4O75487 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
GPC4O75487 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms